bioRxiv · 10.64898/2026.09.29.755189
Fiber alignment alone is insufficient to predict cellular contact guidance responses in engineered 3D collagen hydrogels
Abstract
In breast cancer, collagen fiber alignment and the second harmonic generation forward-to-backward ratio (F/B), an optical measurement sensitive to fibril-scale organization within collagen fibers, have each been associated with metastatic outcome. Although both are measured at the tumor-stromal interface, in vitro studies have largely examined them separately, because experimental systems have not allowed the two to be varied independently. To address this technical gap, we used a microfluidic biofabrication approach to generate paired aligned and unaligned regions within 3D collagen hydrogels via extensional strain and varied measured F/B across gels by changing the pre-gel pH. The resulting library covered alignment values reported in breast tumors and F/B values associated with poorer metastatic outcome in invasive ductal carcinoma at matched matrix stiffness, pore diameter, and fiber fraction. In MDA-MB-231 cells, alignment biased migration along the fiber axis without changing migration speed, as expected, but the magnitude of the contact guidance response varied with measured F/B. In contrast, MCF-7 cells showed little overall contact guidance, yet migrated ~30% faster in high F/B than low F/B gels in both aligned and unaligned regions. Together, these results show that cells migrated differently in matrices with similar fiber alignment. Thus, including measured F/B may provide additional information to help anticipate how cells migrate in collagen environments that appear similar based on alignment alone.
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Esmaili, P., Elias, T. M., Joshi, I. M., Simon, R. A., De Silva, D., Farajollahi, S., Harris, O. M., Brown, E. B., Abhyankar, V. V.. 2026-09-30. Fiber alignment alone is insufficient to predict cellular contact guidance responses in engineered 3D collagen hydrogels. https://doi.org/10.64898/2026.09.29.755189
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