bioRxiv ScienceSearch

bioRxiv · 10.1101/518506

Grey Matter Age Prediction as a Biomarker for Risk of Dementia: A Population-based Study

Abstract

Key PointsO_ST_ABSQuestionC_ST_ABSIs the gap between brain age predicted from MRI and chronological age associated with incident dementia in a general population of Dutch adults?\n\nFindingsBrain age was predicted using a deep learning model, using MRI-derived grey matter density maps. In a population based study including 5496 participants, the observed gap was significantly associated with the risk of dementia.\n\nMeaningThe gap between MRI-brain predicted and chronological age is potentially a biomarker for dementia risk screening.\n\nAbstractO_ST_ABSImportanceC_ST_ABSThe gap between predicted brain age using magnetic resonance imaging (MRI) and chronological age may serve as biomarker for early-stage neurodegeneration and potentially as a risk indicator for dementia. However, owing to the lack of large longitudinal studies, it has been challenging to validate this link.\n\nObjectiveWe aimed to investigate the utility of such a gap as a risk biomarker for incident dementia in a general Dutch population, using a deep learning approach for predicting brain age based on MRI-derived grey matter maps.\n\nDesignData was collected from participants of the cohort-based Rotterdam Study who underwent brain magnetic resonance imaging between 2006 and 2015. This study was performed in a longitudinal setting and all participant were followed up for incident dementia until 2016.\n\nSettingThe Rotterdam Study is a prospective population-based study, initiated in 1990 in the suburb Ommoord of in Rotterdam, the Netherlands.\n\nParticipantsAt baseline, 5496 dementia- and stroke-free participants (mean age 64.67{+/-}9.82, 54.73% women) were scanned and screened for incident dementia. During 6.66{+/-}2.46 years of follow-up, 159 people developed dementia.\n\nMain outcomes and measuresWe built a convolutional neural network (CNN) model to predict brain age based on its MRI. Model prediction performance was measured in mean absolute error (MAE). Reproducibility of prediction was tested using the intraclass correlation coefficient (ICC) computed on a subset of 80 subjects. Logistic regressions and Cox proportional hazards were used to assess the association of the age gap with incident dementia, adjusted for years of education, ApoE{varepsilon}4 allele carriership, grey matter volume and intracranial volume. Additionally, we computed the attention maps of CNN, which shows which brain regions are important for age prediction.\n\nResultsMAE of brain age prediction was 4.45{+/-}3.59 years and ICC was 0.97 (95% confidence interval CI=0.96-0.98). Logistic regression and Cox proportional hazards models showed that the age gap was significantly related to incident dementia (odds ratio OR=1.11 and 95% confidence intervals CI=1.05-1.16; hazard ratio HR=1.11 and 95% CI=1.06-1.15, respectively). Attention maps indicated that grey matter density around the amygdalae and hippocampi primarily drive the age estimation.\n\nConclusion and relevanceWe show that the gap between predicted and chronological brain age is a biomarker associated with risk of dementia development. This suggests that it can be used as a biomarker, complimentary to those that are known, for dementia risk screening.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Wang, J., Knol, M., Tiulpin, A., Dubost, F., de Bruijne, M., Vernooij, M., Adams, H., Ikram, M. A., Niessen, W., Roshchupkin, G.. 2019-01-12. Grey Matter Age Prediction as a Biomarker for Risk of Dementia: A Population-based Study. https://doi.org/10.1101/518506

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

Adding noise to Markov cohort models

Following its introduction over thirty years ago, the Markov state-transition cohort model has been used extensively to model population trajectories over time in decision modeling and cost-effectiveness studies. We recently showed that a cohort model represents the average of a continuous-time stochastic process on a multidimensional integer lattice governed by a master equation (ME), which represents the time-evolution of the probability function of a integer-valued random vector. From this theoretical connection, this study introduces an alternative modeling method, stochastic differential equation (SDE), which captures not only the mean behavior but also the variance. We first derive the continuous approximation to the master equation by relaxing integrality constraint of the state space in the form of Fokker Planck equation (FPE), which represents the time-evolution of the probability function of a real-valued random vector. Instead of working with the FPE, the SDE method constitutes time-evolution of the random vector of population counts. We derive the SDE from first principles and describe an algorithm to construct an SDE and solve the SDE via simulation for use in practice. We show the applications of SDE in two case studies. The first example demonstrates that the population trajectories, the mean and the variance, from the SDE and other commonly-used methods match. The second examples shows that users can readily apply the SDE method in their existing works without the need for additional inputs. In addition, in both examples, the SDE is superior to microsimulation in terms of computational speed. In summary, the SDE provides an alternative modeling framework and is less computationally expensive that microsimulation for a typical modeling problem in decision analyses.

epidemiology

Evaluating a digital sepsis alert in a London multi-site hospital network: a natural experiment using electronic health record data

ObjectiveTo determine the impact of a digital sepsis alert on patient outcomes in a UK multi-site hospital network.\n\nMethodsA natural experiment utlising the phased introduction of a digital sepsis alert into a multi-site hospital network. Sepsis alerts were either visible to clinicans (the intervention group) or running silently and not visible (the control group). Inverse probability of treatment weighted multivariable logistic regression was used to estimate the effect of the intervention on patient outcomes.\n\nOutcomes: In-hospital 30-day mortality (all inpatients), prolonged hospital stay ([≥]7 days) and timely antibiotics ([≤]60 minutes of the alert) for patients who alerted in the Emergency Department.\n\nResultsThe introduction of the alert was associated with lower odds of death (OR:0.76; 95%CI:(0.70, 0.84) n=21,183); lower odds of prolonged hospital stay [≥]7 days (OR:0.93; 95%CI:(0.88, 0.99) n=9988); and in patients who required antibiotics, an increased odds of receiving timely antibiotics (OR:1.71; 95%CI:(1.57,1.87) n=4622).\n\nDiscussionCurrent evidence that digital sepsis alerts are effective is mixed. In this large UK study a digital sepsis alert has been shown to be associated with improved outcomes, including timely antibiotics, which may suggest a causal pathway. It is not known whether the presence of alerting is responsible for improved outcomes, or whether the alert acted as a useful driver for quality improvement initiatives.\n\nConclusionsThese findings strongly suggest that the the introduction of a network-wide digital sepsis alert is associated with improvements in patient outcomes, demonstrating that digital based interventions can be successfully introduced and readily evaluated.\n\nFundingImperial NIHR Biomedical Research Centre: NIHR-BRC-P68711.

epidemiology

Anopheles bionomic, insecticide resistance and malaria transmission in southwest Burkina Faso: a pre-intervention study

BackgroundThe present study presents results of entomological surveys conducted to address the malaria vectors bionomic, insecticide resistance and transmission prior to the implementation of new strategies complement long-lasting insecticidal nets (LLINs) in the framework of a randomized control trial in southwest Burkina Faso. MethodsWe conducted entomological surveys in 27 villages during the dry cold season (January 2017), dry hot season (March 2017) and rainy season (June 2017). We carried out hourly catches (from 17:00 to 09:00) inside and outside 4 houses in each village using the Human Landing Catch technique. Mosquitoes were identified using morphological taxonomic keys. Specimens belonging to the Anopheles gambiae complex and Funestus Group were identified using molecular techniques as well as detection of Plasmodium falciparum infection and insecticide resistance target-site mutations. ResultsEight Anopheles species were detected in the area. Anopheles funestus s.s was the main vector during the dry cold season. It was replaced by Anopheles coluzzii during the dry hot season whereas An. coluzzii and An. gambiae s.s. were the dominant species during the rainy season. Species composition of the Anopheles population varied significantly among surveys. All researched target site mutation of insecticide resistance (kdr-w, kdr-e and ace-1) were detected in all members of the An. gambiae complex of the area but at different frequencies. We observed early and late biting phenotypes in the main malaria vector species. Entomological inoculation rates were 0.087, 0.089 and 0.375 infected bites per human per night during dry cold season, dry hot season and rainy season, respectively. ConclusionThe intensity of malaria transmission was high despite the universal coverage with LLINs. We detected early and late biting phenotypes in the main malaria vector species as well as physiological insecticide resistance mechanisms. These vectors might mediate residual transmission. These data highlight the need to develop complementary tools in addition to LLINs in order to better control resistant malaria vectors and to monitor insecticide resistance.

epidemiology