A versatile semiautomated image analysis workflow for time-lapsed camera trap image classification.

Celis, G.; Ungar, P. S.; Sokolov, A.; Sokolova, N.; Böhner, H.; Liu, D.; Ziker, J.; Gilg, O.; Fufachev, I.; Pokrovskay, O.; Ims, R. A.; Ivanov, V.; Ehrich, D.

doi:10.1101/2022.12.28.522027

bioRxiv · 10.1101/2022.12.28.522027

A versatile semiautomated image analysis workflow for time-lapsed camera trap image classification.

Celis, G.·Ungar, P. S.·Sokolov, A.·Sokolova, N.·Böhner, H.·Liu, D.·Ziker, J.·Gilg, O.·Fufachev, I.·Pokrovskay, O.·Ims, R. A.·Ivanov, V.·Ehrich, D.

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Abstract

O_LICamera trap arrays can generate thousands to millions of images that require exorbitant time and effort to classify and annotate by trained observers. Computer vision has evolved as an automated alternative to manual classification. The most popular computer vision solution is the supervised Machine Learning technique, which uses labeled images to train automated classification algorithms. C_LIO_LIWe propose a multi-step semi-automated workflow that consists of (1) identifying and separating bad-from good-quality images, (2) parsing good images into animals, humans, vehicles, and empty, and (3) cropping animals from images and classifying them into species for manual inspection. We trained, validated, and evaluated this approach using 548,627 images from 46 cameras in two regions of the Arctic (northeastern Norway, and Yamal Peninsula, Russia). C_LIO_LIWe obtained an accuracy of 0.959 for all three steps combined with the complete year test data set at Varanger and 0.922 at Yamal, reducing the number of images that required manual inspection to 7.9% of the original set from Varanger and 3.2% from Yamal. C_LIO_LIResearchers can modify this multi-step process to meet their specific needs for monitoring and surveying wildlife, providing greater flexibility than current options available for image classification. C_LI

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Celis, G., Ungar, P. S., Sokolov, A., Sokolova, N., Böhner, H., Liu, D., Ziker, J., Gilg, O., Fufachev, I., Pokrovskay, O., Ims, R. A., Ivanov, V., Ehrich, D.. 2022-12-30. A versatile semiautomated image analysis workflow for time-lapsed camera trap image classification.. https://doi.org/10.1101/2022.12.28.522027

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