Biology subjects

Picas, L.

Publications and source records attributed to Picas, L..

10 recordsLinked to original sources

bioRxiv2025

Architecture and function of Bud3 and Bud4-induced septin structures

At the time of cytokinesis, a double septin ring is assembled at the division site in many eukaryotic cells. In budding yeast the double ring is made by two arrays of circumferential septin filaments at the two sides of the bud neck, which are thought to compartmentalize the membrane around the cleavage site. Integrity of the double septin ring requires the anillin Bud4 and its presumed partner Bud3, which associate with septins in mitosis and have separate, yet unknown, roles in stabilizing septin circumferential filaments. Through in vitro reconstitution assays using purified proteins, we show that Bud3 and Bud4 organise septin filaments in distinct ways, while together they cooperate to assemble higher-order septin networks. In agreement with their separate roles in septin organization, Bud3 and Bud4 bind to different septins and require septins to associate with each other, indicating that they modulate septin architecture independently but synergistically. We also provide evidence that Bud3 and Bud4 bind membranes in vivo and in vitro, consistent with the presence of lipid-binding domains in their primary sequence. Using bud3 bud4 double mutants that lack the septin double ring, we show that in vivo proteins marking cytokinetic remnants require the double ring to efficiently concentrate at the division site, while other proteins landing at the bud neck at cytokinesis are unaffected. Thus, we propose that a septin double ring may imprint a selective spatial memory for cytokinesis that is transmitted throughout subsequent cell divisions.

cell biology↗

bioRxiv2024

Wafer-scale integration of alpha-quartz thin films towards super high frequency piezoelectric bioNEMS for arbovirus detection

Micro and nanoelectromechanical systems (MEMS/NEMS), especially piezoelectric resonators, offer a promising strategy for the manufacturing of point-of-care devices providing rapid, sensitive, and field-deployable tests with minimal user training for the diagnostic of viral infections. High-frequency (HF) MEMS/NEMS have the potential for ultrasensible mass-loading devices. Yet, their use for biomedical applications requires challenging manufacturing qualities. Here, we develop a large-scale chemical integration of epitaxial -quartz (100) thin films on silicon wafers up to 4-inches. This methodology allows the microfabrication of wafer-scale piezoelectric -quartz/silicon bioMEMS using a recognition layer capable of selectively detecting emerging arboviruses over other viral loads. Using contact-free vibrometry, we show a mass sensitivity of the bioMEMS device of 22.4 pg/Hz in liquid conditions and a Chikungunya virus limit of detection of 9 ng/ml. To reach piezoelectric transduction for compact quartz sensor devices, we develop NEMS resonators at super HF, i.e., 17.8 GHz with a quality factor of 280 which represents a QxF product of 4.98{middle dot}1012. These -quartz NEMS can reach thicknesses between 100 and 800 nm and lateral dimensions up to 9 mm2. Our work opens the door for cost-efficient single-chip epitaxial piezoelectric -quartz/Si ultrasensitive NEMS sensors manufactured exclusively by soft-chemistry for biomedical applications and many other fields.

bioengineering↗

bioRxiv2024

Septin filament assembly assists the lateral organization of membranes

Compartmentalized interactions of plasma membrane components are essential to support many cell functions, from signaling to cell division, adhesion, migration, or phagocytosis. Cytoskeletal-membrane interactions play an important role in forming membrane compartments, and this feature has been primarily studied through the actin cytoskeleton. Unlike actin, septins directly interact with membranes, acting as scaffolds to recruit proteins to specific cellular locations and as structural diffusion barriers for membrane components. However, how septins interact with and remodel the local membrane environment is unclear. Here we combined minimal reconstituted systems based on fluorescence microscopy and quantitative atomic force microscopy together with live yeast cell imaging and STED microscopy to study septin-mediated membrane organization. Our results show that septins self-assembly into filament-based sub-micrometric patches and high-order structures prompt their membrane-organizing role in vitro and in yeast cells, respectively. Furthermore, we show that the polybasic domain of Cdc11, in addition to the amphipathic helix of Cdc12, plays an essential role in supporting the membrane remodeling and curvature-sensing properties of yeast septins. Collectively, our work provides a framework for understanding the molecular mechanisms by which septins can support cellular functions intimately linked to membranes.

cell biology↗

bioRxiv2022

Caveolae and Bin1 form ring-shaped platforms for T-tubule initiation

Excitation-contraction coupling requires a highly specialized membrane structure, the triad, composed of a plasma membrane invagination, the T-tubule, surrounded by two sarcoplasmic reticulum terminal cisternae. Although the precise mechanisms governing T-tubule biogenesis and triad formation remain largely unknown, studies have shown that caveolae participate in T-tubule formation and mutations of several of their constituents induce muscle weakness and myopathies. Here, we demonstrate that, at the plasma membrane, caveolae composed of caveolin-3 and Bin1 assemble into ring-like structures from which emerge tubes enriched in the dihydropyridine receptor. Overexpression of Bin1 lead to the formation of both rings and tubes and we show that Bin1 forms scaffolds on which caveolae accumulate to form the initial T-tubule. Cav3 deficiency caused by either gene silencing or pathogenic mutations cause defective ring formation and perturbed Bin1-mediated tubulation that may explain defective T-tubule organization in mature muscles. Our results uncover new pathophysiological mechanisms that may prove relevant to myopathies caused by Cav3 or Bin1.

cell biology↗

bioRxiv2022

BIN1/Amphiphysin 2 and ezrin drive filopodia-like structures in myoblasts

Amphiphysin 2 (BIN1) is a membrane and actin remodeling protein mutated in congenital and adult centronuclear myopathies. Here, we report an unexpected function of this N-BAR domain protein BIN1 in filopodia formation. We demonstrated that BIN1 expression is necessary and sufficient to induce filopodia formation. BIN1 is present at the base of forming filopodia and all along filopodia, where it colocalizes with F-actin. We identify that BIN1-mediated filopodia formation requires IRSp53, which allows its localization at negatively-curved membrane topologies. Our results show that BIN1 bundles actin in vitro. Finally, we identify that BIN1 regulates the membrane-to-cortex architecture and functions as a molecular platform to recruit actin-binding proteins, dynamin and ezrin, to promote filopodia formation.

cell biology↗

bioRxiv2021

Structure and dynamics of FCHo2 docking on membranes

Clathrin-mediated endocytosis (CME) is a central trafficking pathway in eukaryotic cells regulated by phosphoinositides. The plasma membrane phosphatidylinositol-4,5-bisphosphate (PI(4,5)P2) plays an instrumental role in driving CME initiation. The F-BAR domain only protein 1 and 2 complex (FCHo1/2) is among the early proteins that reach the plasma membrane, but the exact mechanisms triggering its recruitment remains elusive. Here, we show the molecular dynamics of FCHo2 self-assembly on membranes by combining bottom-up synthetic approaches on in vitro and cellular membranes. Our results indicate that PI(4,5)P2 domains assist FCHo2 docking at specific membrane regions, where it self-assembles into ring-like shape protein patches. We show that binding of FCHo2 on cellular membranes promotes PI(4,5)P2 clustering at the boundary of cargo receptors and that this accumulation enhances clathrin assembly. Thus, our results provide a mechanistic framework that could explain the recruitment of early PI(4,5)P2-interacting proteins at endocytic sites.

biophysics↗

bioRxiv2019

Nanoscale topography templates the organization of stable clathrin/AP-2 structures

Membrane shape is a key feature of many cellular processes, including cell differentiation, division, migration, and trafficking. The development of nanostructured surfaces allowing for the in situ manipulation of membranes in living cells is crucial to understand these processes, but this requires complicated and limited-access technologies. Here, we investigate the self-organization of cellular membranes by using a customizable and bench top method allowing to engineer 1D SiO2 nanopillar arrays of defined sizes and shapes on high-performance glass compatible with advanced microscopies. As a result of this original combination, we provide a mapping of the morphology-induced modulation of the cell membrane mechanics, dynamics and steady-state organization of key protein complexes implicated in cellular trafficking and signal transduction.

biophysics↗

bioRxiv2018

Quantitative Mapping of Free-Standing Lipid Membranes on Nano-Porous Mica Substrates

The physic-chemistry of biological membranes is at the origin of fundamental cellular functions such as vesicle trafficking, cell adhesion and migration1-3. Because most of intracellular shapes and local demixing of membranes take place in the nanometer scale, AFM becomes an extremely powerful technique to assess the properties of these biological membranes. Porous substrates provide an elegant strategy to avoid the conundrum of placing soft and thin biomembranes on hard substrates for AFM studies, although the surface chemistry make the actual substrates rather challenging setups. Here, we have engineered porous systems on the most widely used substrate in AFM, mica muscovite, with tunable pore sizes from some tens to few hundreds nanometers for biological applications. We show that free-standing bilayers on nano-porous can be obtained by using well-established vesicle spreading methods and that they display equivalent nano-mechanical stability and phsyco-chemical properties to that of membranes on conventional mica supports. By reducing the pore radius < 40 nm and limiting the contribution of membrane tension to the elastic response of free-standing membranes we estimate a bending modulus of 18 kbT and 73 kbT for DOPC and DPPC bilayers, respectively. The quantitative mapping of suspended membranes shows a different mechanical response at the pore rims, which is more pronounced for DPPC and suggest a different lipid ordering. We find that the combination of membrane bending and the different lipid packing at the edges of pores shapes the curvature of free-standing membranes on pores in the range of few tens of nm.

biophysics↗

bioRxiv2018

Ezrin enrichment on curved membranes requires a specific conformation or interaction with a curvature-sensitive partner

One challenge in current cell biology is to decipher the biophysical mechanisms governing protein enrichment on curved membranes and the resulting membrane deformation. The ERM protein ezrin is abundant and associated with cellular membranes that are flat or with positive or negative curvatures. Using in vitro and cell biology approaches, we assess mechanisms of ezrins enrichment on curved membranes. We evidence that ezrin (ezrinWT) and its phosphomimetic mutant T567D (ezrinTD) do not deform membranes but self-assemble anti-parallelly, zipping adjacent membranes. EzrinTDs specific conformation reduces intermolecular ezrin interactions, allows binding to actin filaments, and promotes ezrin binding to positively curved membranes. While neither ezrinTD nor ezrinWT senses negative membrane curvature alone, we demonstrate that interacting with curvature sensors I-BAR-domain proteins facilitates ezrin enrichment in negatively curved membrane protrusions. Overall, our work reveals new mechanisms, specific conformation or binding to a curvature sensor partner, for targeting curvature insensitive proteins to curved membranes.

biophysics↗

bioRxiv2017

ProLIF: a quantitative assay for investigating integrin cytoplasmic protein interactions and synergistic membrane effects on proteoliposomes

Integrin transmembrane heterodimeric receptors control a wide range of biological interactions by triggering the assembly of large multiprotein complexes at their cytoplasmic interface. A diverse set of methods have been used to investigate cytoplasmic interactions between integrins and intracellular proteins. These predominantly consist of peptide-based pull-downs and biochemical immuno-isolations from detergent-solubilized cell lysates. However, quantitative methods to probe integrin-protein interactions in a more biologically relevant context where the integrin is embedded within a lipid bilayer have been lacking. Here we describe a technique called ProLIF (Protein-Liposome Iinenteractions by Flow cytometry) to reconstitute recombinant integrin transmembrane domain (TMD) and cytoplasmic tail (CT) fragments on liposomes as individual or {beta} subunits or as {beta} heterodimers and, using flow cytometry, to rapidly and quantitatively measure protein interactions with these membrane-embedded integrins. Importantly, the assay can analyse binding of fluorescent proteins directly from cell lysates without further purification steps. By combining integrins with membrane lipids to generate proteoliposomes, the effects of membrane composition such as PI(4,5)P2 presence on protein recruitment to the integrin CTs can be analyzed. ProLIF requires no specific instrumentation, apart from a standard flow cytometer and can be applied to measure a broad range of membrane-dependent protein-protein interactions with the potential for high-throughput/multiplex analyses.

molecular biology↗