Biology subjects

Fall, A. G.

Publications and source records attributed to Fall, A. G..

6 recordsLinked to original sources

bioRxiv2026

Population genetic structure and connectivity of Glossina palpalis gambiensis and G. morsitans submorsitans in Southwestern Senegal

In sub-Saharan Africa, human and animal health is threatened by African trypanosomoses. These diseases are caused by trypanosomes that are transmitted primarily by tsetse flies. Vector control remains one of the most effective strategies for reducing disease transmission, but requires a minimum level of knowledge of the population biology, ecology and dispersal patterns of the targeted vectors. In this respect, population genetic approaches using appropriate polymorphic genetic markers can provide valuable tools to inform and optimize control strategies. Senegal is currently engaged in a national tsetse control programme and has been identified as a study country within a European Union-funded research initiative, COMBAT (controlling and progressively minimizing the burden of animal trypanosomosis). Baseline entomological studies are currently underway in the Sine Saloum (Southern Senegal). This preliminary study aimed to characterize the population genetic structure and connectivity of tsetse fly species present in Southern Senegal, Glossina palpalis gambiensis and G. morsitans submorsitans, in order to assess their population sizes (geographically and demographically), population densities and dispersal capacities. The two species exhibited markedly contrasting population structures. The first, G. p. gambiensis, displayed an isolation by distance with rather dense subpopulations exchanging immigrants at short distances (1.6 km/generation) and continuously from Sine-Saloum to Casamance, in line with the apparent continuity of the mangrove network found along this coast. In contrast, G. m. submorsitans presented a relatively dense population over a 75 km wide area, fragmented into sparsely distributed, very dense and interconnected pockets. These findings indicate that G. p. gambiensis likely constitutes a large metapopulation comprising 3266 effective individuals on average (and up to 7765), whereas G. m. submorsitans appeared as a single and large population, scattered in small pockets that could be readily replenished by immigrants from distant areas in case of control. These results suggest that elimination is not a realistic option for any of these two populations. Alternatively, localized integrated pest management is likely to be the most effective approach for controlling the negative effects of these biting flies on domestic animals, by reducing trypanosome transmission. However, further entomological investigations and the use of more informative genetic markers are needed to obtain a more precise understanding of the epidemiological processes involved.

ecology↗

bioRxiv2025

How fast can PPRV spread? Analyzing the results of an experimental PPRV infection of goats equipped with Ultra-WideBand sensors

Peste des Petits Ruminants (PPR) is a highly contagious disease affecting goats and sheep. The speed and extent of its spread depend on contact patterns and the viruss intrinsic characteristics. To estimate propagation speed and the role of inter-individual patterns, we analyzed the results of a series of 12 experimental infections conducted in five different sessions, involving six or seven goats in a secured stable. In each experiment, one animal was inoculated with the PPR strain and placed in contact with the other naive animals. All the animals were equipped with Ultra-WideBand sensors to collect inter-individual distance data. The duration of this phase varied from 1 to 48 hours across the experiments. Afterwards, the animals were isolated and monitored for three to five weeks. Temperature, symptoms, nasal and ocular discharges, and blood samples were routinely collected to detect the presence of the virus. Using Bayesian statistical analysis, data on inter-individual distances, and health status were analyzed to estimate R0, the incubation period, and PPRV transmissibility. The latter was used to estimate the exposure period, i.e., the minimum amount of time for a naive animal to become infected. Of the 70 naive animals exposed to the virus, 18 were infected. R0 was estimated to be around 4.3 or 8.6, depending on the infectious period value. The incubation period was estimated to be around 16.3 days (95% CI: 12.6-23.3 days). The exposure time varies greatly depending on the density, ranging from nearly two days at low density to around four hours at high density. Large gatherings of animals, such as at livestock markets, could greatly facilitate the spread of PPRV. Furthermore, the long incubation period coupled with livestock mobility could favor the virus geographical dissemination on a large scale. Author summaryPPR is an infectious disease that is transmitted directly and affects goats and sheep. Since its discovery in the Ivory Coast in 1942, the PPR virus has spread worldwide, reaching China in 2010 and Europe in 2018. Despite the fact that PPR poses a huge threat to the lives of small ruminants and the livelihoods of smallholders, more research is needed into its epidemic potential and transmission speed. Here, we used a combined approach of experimental infections and contact tracing with UWB devices to estimate the probability of transmission of a specific PPRV strain, and to determine the minimum exposure time required for an animal to become infected. Our results indicate that reducing the average distance between animals by a factor of four could reduce exposure time tenfold, indicating a much higher risk for high-density herds compared to roaming ones. Coupled with new estimates of R0 and incubation time inferred from data analysis, our work sheds light on the danger posed by PPR. These informations are valuable to veterinarians and policymakers, to better assess the risk of introduction, spread, and impact of PPR, to implement timely and effective interventions.

animal behavior and cognition↗

bioRxiv2023

Host influence on the eukaryotic virome of sympatric mosquitoes and abundance of diverse viruses with a broad host range.

Mosquitoes harbor a large diversity of eukaryotic viruses. Those viromes probably influence mosquito physiology and the transmission of human pathogens. Nevertheless, their ecology remains largely unstudied. Here, we address two key questions in virome ecology. First, we assessed the influence of mosquito species on virome taxonomic diversity and relative abundance. Contrary to most previous studies, the potential effect of the habitat was explicitly included. Thousands of individuals of Culex poicilipes and Culex tritaeniorhynchus, two vectors of viral diseases, were concomitantly sampled in three habitats over two years. A total of 95 viral taxa from 25 families were identified with meta-transcriptomics, with 75% of taxa shared by both mosquitoes. Viromes significantly differed by mosquito species but not by habitat. Differences were largely due to changes in relative abundance of shared taxa. Then, we studied the diversity of viruses with a broad host range. We searched for viral taxa shared by the two Culex species and Aedes vexans, another disease vector, present in one of the habitats. Twenty-six out of the 163 viral taxa were found in the three mosquitoes. These taxa encompassed 14 families. A database analysis supported broad host ranges for many of those viruses, as well as a widespread geographical distribution. Thus, the viromes of mosquitoes from the same genera mainly differed in the relative abundance of shared taxa, whereas differences in viral diversity dominated between mosquito genera. Whether this new model of virome diversity and structure applies to other mosquito communities remains to be determined.

ecology↗

bioRxiv2019

Rift Valley fever in northern Senegal : a modelling approach to analyse the processes underlying virus circulation recurrence

Rift Valley fever (RVF) is endemic in northern Senegal, a Sahelian area characterized by a temporary pond network that drive both RVF mosquito population dynamics and nomadic herd movements. To investigate the mechanisms that explain RVF recurrent circulation, we modelled a realistic epidemiological system at the pond level integrating vector population dynamics, resident and nomadic ruminant herd population dynamics, and nomadic herd movements recorded in Younoufere area [1]. To calibrate the model, serological surveys were performed in 2015-2016 on both resident and nomadic herds in the same area. Mosquito population dynamics were obtained from a published model trained in the same region [2]. Model comparison techniques were used to compare five different scenarios of virus introduction by nomadic herds associated or not with vertical transmission in Aedes vexans. Our serological results confirmed a long lasting RVF endemicity in resident herds (IgG seroprevalence rate of 15.3%, n=222), and provided the first estimation of RVF IgG seroprevalence in nomadic herds in West Africa (12.4%, n=660). Multivariate analysis of serological data suggested an amplification of the transmission cycle during the rainy season with a peak of circulation at the end of that season. The best scenario of virus introduction combined yearly introductions of RVFV from 2008 to 2015 (the study period) by nomadic herds, with a proportion of viraemic individuals predicted to be larger in animals arriving during the 2nd half of the rainy season (3.4%). This result is coherent with the IgM prevalence rate (4%) found in nomadic herds sampled during the 2nd half of the rainy season. Although the existence of a vertical transmission mechanism in Aedes cannot be ruled out, our model demonstrates that nomadic movements are sufficient to account for this endemic circulation in northern Senegal. Author summaryRift Valley fever (RVF) is one of the most important vector borne disease in Africa, seriously affecting the health of domestic ruminants and humans and leading to severe economic consequences. This disease is endemic in northern Senegal, a Sahelian area characterized by a temporary pond network that drive both RVF mosquito population dynamics and nomadic herd movements. Two non-exclusive mechanisms may support this endemicity: recurrent introductions of the virus by nomadic animals, and vertical transmission of the virus (i.e. from infected female mosquito to eggs) in local Aedes populations. The authors followed up during 1 year resident and nomadic herds. They used the data thus obtained to model a realistic epidemiological system at the pond level integrating vector population dynamics, resident and nomadic ruminant herd population dynamics. They found that the best scenario explaining RVF remanence combined yearly introductions of RVFV by nomadic herds, with a proportion of viraemic predicted to be larger in animals arriving during the 2nd half of the rainy season, which is consistent with an amplification of virus circulation in the area during the rainy season. Although the existence of a vertical transmission mechanism in Aedes cannot be ruled out, their results demonstrates that nomadic movements are sufficient to account for this endemic circulation in northern Senegal.

ecology↗

bioRxiv2019

Feeding behavior of Aedes (Aedimorphus) vexans arabiensis, a Rift valley fever virus vector in the Ferlo pastoral ecosystem of Senegal.

Host-vector contact is a key factor in vectorial capacity assessment and thus the transmission of mosquito-borne viruses such as Rift Valley Fever (RVF), an emerging zoonotic disease of interest in West Africa. The knowledge of the host-feeding patterns of vector species constitutes a key element in the assessment of their epidemiological importance in a given environment. The aim of this work was to identify the blood meal origins of Aedes vexans arabiensis Patton (Diptera: Culicidae), the main vector of RVF virus in the Ferlo pastoral ecosystem of Senegal. Engorged female mosquitoes were collected in Younoufere in the pastoral ecosystem in the Ferlo region during the 2014 rainy season. CDC light CO2-baited traps were set at six sites for two consecutive nights every month from July to November. Domestic animals present around traps were identified and counted for each trapping session. Blood meal sources of engorged mosquitoes were identified using a vertebrate-specific multiplexed primer set based on cytochrome b. Blood meal sources were successfully identified for 319 out of 416 blood-fed females (76.68%), of which 163 (51.1%) were single meals, 146 (45.77%) mixed meals from two different hosts and 10 (3.13%) mixed meals from three different hosts. Aedes vexans arabiensis fed preferentially on mammals especially on horse compared to other hosts (P < 0.001). Proportions of single and mixed meals showed significant temporal (P < 0.001) and spatial variations (P < 0.001) according to hosts availability. Aedes vexans arabiensis shows an opportunistic feeding behavior depending on the host availability. Results were discussed in relation with the Rift valley fever virus transmission and vector involvement as well as its primary hosts.

epidemiology↗

bioRxiv2018

Chilling, irradiation and transport of male Glossina palpalis gambiensis pupae: effect on the emergence, flight ability and survival.

BackgroundThe sterile insect technique (SIT) requires mass-rearing of the target species, irradiation to induce sexual sterility and transportation from the mass-rearing facility to the target site. Those treatments require several steps that may affect the biological quality of sterile males. This study has been carried out to evaluate the relative impact of the chilling, irradiation and transport on emergence rate, flight ability and survival of sterile male tsetse flies Glossina palpalis gambiensis.\n\nResultsChilling, irradiation and transport all affected the quality control parameters studied. The emergence rate was significantly reduced by long chilling periods and transport, i.e. from 92% at the source insectary to 78% upon arrival in Dakar. Flight ability was affected by all three parameters with 31% operational flies lossed between the source and arrival insectaries. Only survival under stress was not affected by any of the treatments.\n\nConclusionThe chilling period and transport were the main treatments which impacted significantly the quality of sterile male pupae. Therefore, the delivery of sterile males was divided over two shipments per week in order to reduce the chilling time and improve the quality of the sterile males. Quality of the male pupae may further be improved by reducing the transport time and vibration during transport.\n\nAuthor summaryTsetse fly and the disease it transmits, trypanosomosis, remain an enormous challenge in several countries in sub-Saharan Africa. The use of the Sterile Insect Technique (SIT) has become one of the components of the eradication of tsetse fly in Africa. The sterile insect technique (SIT) requires mass-rearing of the target species, irradiation to induce sexual sterility and transportation from the mass-rearing facility to the target site. In this study, we demonstrate the relative impact of the chilling, irradiation and transport on the emergence rate, the flight ability and the survival of sterile male tsetse flies Glossina palpalis gambiensis. We found that the chilling, irradiation and transport affected the emergence rate and flight ability. But the survival of the sterile male under stress was not affected by any of the treatments. Hence, the quality of the male pupae may further be improved by reducing the transport time and vibration during transport.

physiology↗