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Dokter, A. M.

Publications and source records attributed to Dokter, A. M..

3 recordsLinked to original sources

The Dark Ecology Dataset: Measurements of Aerial Biomass in US Weather Radar from 1995 to 2025

The US NEXRAD radar network has monitored the aerosphere over the US and its territories continuously since the 1990s and archived nearly 300 million radar volume scans. These data contain a wealth of information about the movements of birds, bats, and insects. Historically, this biological information was difficult to access due to the amount of data and challenges in analyzing it. In the last 15 years, fueled by computational and methodological advances, large-scale aeroecology research has blossomed. However, comprehensive analyses of the NEXRAD archive remain very costly. We collected measurements from every volume scan in the NEXRAD archive--nearly 300 million data files total--to assemble a dataset of aerial biological activity over the US from 1995 to 2025. The core data are vertical profiles, which summarize biological activity at different heights above the radar station for each volume scan. We also provide time series data products that aggregate vertical profiles to point measurements at radar stations across time. These data products can support a range of aeroecology analyses at significantly reduced effort.

ecology↗

Population-level migration modeling of North American birds through data integration with BirdFlow

BackgroundAccurate information on population-level movements of migratory animals is essential for understanding migration and for designing effective conservation strategies in a changing world. Yet such information remains scarce for most migratory species due to the effort and expense needed to collect data across their full distribution ranges. BirdFlow is a probabilistic modeling framework that infers population-level movements from weekly species distribution maps produced by the participatory science project eBird. However, BirdFlow models have only been tuned for a handful of species using high-resolution individual tracking data, which is not available for most migratory species. MethodsHere, we introduce a general tuning and evaluation framework for BirdFlow that enables the first large-scale integration of distributional and individual-level data to infer animal movement across continents and hundreds of migratory species, eliminating reliance on any single individual-tracking data source. By generalizing the BirdFlow model parametrization, we enable tuning and validation using multiple complementary data sources, including GPS tracks, banding recoveries, and radio telemetry data from the Motus Wildlife Tracking System. We investigate the efficacy of this approach by (1) investigating predictive performance compared to null models; (2) validating the biological plausibility of BirdFlow models by comparing movement properties such as route straightness, number of stopovers, and migration speed between model-generated routes and real movement tracks; and (3) comparing the performance of models tuned on species-specific movement data to models tuned using hyperparameters transferred from other species. ResultsOur results show that BirdFlow models produced by the new tuning framework achieve biologically realistic performance, even for prediction horizons of thousands of kilometers and several months. When species-specific data are unavailable, models can still be tuned using data from other phylogenetically adjacent species to achieve improved performance. ConclusionsBy integrating eBird Status & Trends abundance surfaces with data from banding recaptures, radio telemetry, and GPS tracking, we scale BirdFlow model to 153 North American migratory species, representing the first collection of continental-scale population-level movement and forecasting models. Species-specific tuning improves population-level movement forecasts, while taxonomically informed hyperparameter transfer supports the modeling of data-limited species. Overall, our work offers a foundation for more accurate predictions across hundreds of species for research in ecology and conservation, disease surveillance, aviation, and public outreach.

ecology↗

Analysis of mixtures of birds and insects in weather radar data

Weather radars are increasingly used to study the spatial-temporal dynamics of airborne birds and insects. These two taxa often co-occur and separating their contributions remains a major analytical challenge. Most studies have restricted analyses to locations, seasons, and periods when one or the other taxa dominates. In this study, we describe an analytical method to estimate the proportion of birds and insects from vertical profiles of biological reflectivities, using a minimal number of assumptions on the airspeeds of birds and insects. We evaluated our method on understudied regions where airborne insect density is too high for existing approaches of studying bird migration with weather radars: the tropics (Colombia) and the southern temperate zone (Southeast Australia). Our method estimates that bird and insect signals routinely reach similar magnitudes in these regions. Retrieved patterns across daily and annual cycles reflected expected biological patterns that are indicative of migratory and non-migratory movements in both climates and migration systems. Compared to fixed airspeed thresholding, we obtain finer separation and retain more spatial-temporal complexity that is crucial to revealing aerial habitat use of both taxa. Our analytical procedure is readily implemented into existing software, empowering ecologists to explore aerial ecosystems outside the northern temperate zone, as well as diurnal migration of birds and insects that remains heavily understudied. Lay summaryO_LIWe developed a new method to differentiate between birds and insects in weather radar data. C_LIO_LIThis method uses minimal assumptions about the flight speeds of birds and insects. C_LIO_LIWe tested the method in regions with high insect density: the tropics (Colombia) and southern temperate zone (Southeast Australia). C_LIO_LIOur method estimated proportions of birds and insects that captured expected patterns of daily and annual movements, which were indicative of migratory and non-migratory movement of both taxa. C_LIO_LIUnlike fixed airspeed criteria for bird and insect separation, our approach provides a more detailed understanding of aerial habitat use by both birds and insects. C_LIO_LIThis method can be easily added to existing software, helping ecologists study bird and insect movements in less-studied areas and ecosystems. C_LI

ecology↗