bioRxiv Science⌕ Search

bioRxiv · 10.64898/2026.07.05.736574

Lateral interactions override nucleotide state in determining FtsZ filament curvature

Abstract

The bacterial tubulin homolog FtsZ assembles into dynamic filaments that form the cytokinetic Z-ring and drives constriction during cell division. Whether a nucleotide-dependent FtsZ filament curvature plays a role in constriction is often debated. Here, we combine cryo-electron microscopy and molecular dynamics simulations to understand the structural basis of FtsZ filament curvature. Cryo-EM structures of GTP-bound Spiroplasma FtsZ filaments in two curved states emphasize that curvature is an intrinsic property of FtsZ filament, confirming recent models in which GTP hydrolysis does not dictate protofilament bending in the tubulin family. Consistently, molecular dynamics simulations demonstrate that GTP-bound filaments can adopt a range of curved conformations. The preferred intrinsic curvature appears to be such that the C-terminal end of the globular domain faces the convex surface. Structural analyses of the curved conformations identify dynamic and stationary zones at the longitudinal interfaces of the protofilament, suggesting that structural plasticity of the intermonomer interface contributes to filament bending. Furthermore, we demonstrate that lateral interactions between adjacent protofilaments straighten the filaments, overriding their relaxed curved states. Optimal orientations of lateral interactions in the Z-ring assembly could be brought about by other interacting proteins of the divisome machinery. The straighter filament conformation is likely to stimulate a higher GTPase activity. Together, our findings establish lateral association as a primary determinant for straight FtsZ filaments, analogous to the tubulin protofilaments in a microtubule lattice. The snapshots of structural states provide a mechanistic basis for how the intrinsic curvature facilitates association on the membrane and the physiological relevance of transitions between bent and straight conformations of the FtsZ filament during Z-ring assembly and constriction.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Dutta, S., Chakraborty, J., Kholina, E. G., Kovalenko, I. B., Gudimchuk, N., Gayathri, P.. 2026-07-06. Lateral interactions override nucleotide state in determining FtsZ filament curvature. https://doi.org/10.64898/2026.07.05.736574

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

aaRSID, an engineered pyrrolysyl-tRNA synthetase platform for multi-probe proximity proteomics

Proximity labeling (PL) methods utilize spatially targeted chemical or enzymatic generation of a diffusible, reactive intermediate to covalently tag neighboring proteins in living systems. Unlike other tools for studying molecular interactions, PL can detect transient protein relationships with high spatial and temporal sensitivity, allowing for insight into their roles in biological processes. However, current enzymatic PL tools, such as TurboID and APEX2, are limited by their substrate structure and chemistry, which can generate significant background and/or perturb cellular physiology. To address these limitations, we have developed aminoacyl-tRNA synthetase ID (aaRSID), a PL tool that leverages an engineered pyrrolysyl tRNA synthetase (PylRS) for proximity labeling of proteins. We chose PylRS because it can catalyze promiscuous lysine labeling in the absence of its cognate tRNA and utilize a variety of non-canonical amino acids (ncAAs) as substrates. Here, we demonstrate aaRSID's intrinsic proximity labeling activity, use directed evolution to improve this activity, and apply the improved mutant (aaRSID-Ma1.3) for subcellular proteomics and multiplexed imaging. Our work establishes aminoacyl-tRNA synthetases as a new PL enzyme class and introduces a versatile chemical platform for developing ncAA-derived probes to map cellular microenvironments, greatly expanding the applications possible of PL technology.

biochemistry↗

Cellular uptake of folate-olaparib conjugates via folate receptor-mediated endocytosis: Potential for selective delivery of DNA damage response inhibitors into tumour cells

The folate receptor (FR) is overexpressed in a range of human tumours including ovarian cancer cells. We propose that the overexpression of the FR on the surface of ovarian tumour cells could be exploited for the selective delivery of a DNA damage response inhibitor (DDRi) in the form of an intact folate drug conjugate (FDC). This approach would improve the therapeutic index of the parent DDRi facilitating combination studies of the DDRi-based FDC with DNA damaging chemotherapy. FR-mediated cellular uptake of the proposed folate drug conjugates is requisite for FDC selective delivery into tumours. In this study, we synthesised a series of olaparib-based folate conjugates that maintained the biochemical PARP1 inhibition associated with olaparib and showed binding affinity for the folate receptor. Significantly, we identified compounds 10b and 11 that selectively enter FR overexpressing tumour cells via folate receptor-mediated endocytosis in their intact form and engage with their target as demonstrated by the potent inhibition of PARylation (KB cells, PARylation IC50 = 5.7 and 3.9 nM; respectively).

biochemistry↗

Architecture and Energy Transfer of the Bacterial Photosynthetic Unit

In phototrophic organisms, pigment-protein membrane complexes are densely packed to form photosynthetic units (PSUs) that capture solar energy and convert it into chemical energy. Although the structures of many individual photosynthetic complexes have been resolved, how they are arranged and interact with others within photosynthetic membranes to enable efficient excitation energy transfer (EET) remains poorly understood. Here, we report cryo-electron microscopy structures of PSU supercomplex assemblies from the phototrophic a-proteobacterium Rhodovulum viride, including an RC-LH1 core associated with one or two peripheral LH2 complexes and a curved LH2 tetramer. These membrane-derived assemblies define the relative positions and orientations of neighboring photosynthetic complexes and place their pigment arrays in proximity across antenna-antenna and antenna-core interfaces. Structure-based simulations identify potential EET pathways within the PSU assemblies and reveal rapid energy transfer across both LH2-LH2 and LH2-LH1 interfaces. Collectively, these findings provide insights into the assembly and structural modularity of bacterial PSUs and elucidate how the lateral organization of membrane protein complexes facilitates efficient energy transfer. This work extends structural studies of bacterial photosynthesis from individual complexes to their native higher-order assembly, providing a framework for understanding how photosynthetic supercomplex organization shapes energy migration and for guiding the design of artificial photosynthesis.

biochemistry↗