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bioRxiv · 10.64898/2026.05.01.722221

State-dependent geometric transformations in the mouse hippocampus support fear generalization without loss of discriminability

Abstract

Learning from aversive experiences often generalizes beyond the context in which they occurred. In rodents, a strong aversive event can induce retrospective memory linking (RLI), whereby fear generalizes to a previously neutral context encountered days earlier. Although prior work has shown that RLI is associated with increased co-activity of hippocampal CA1 neurons across neutral and aversive contexts, it remains unclear how broader representational changes support generalization without affecting the ability to discriminate between contexts. Here, we reanalyzed calcium imaging data from dorsal CA1 during RLI to examine how hippocampal representational geometry changes during fear generalization. Using robust, non-parametric measures of population similarity, we show that in mice exhibiting RLI, the representation of the neutral context not only changes over time but becomes more similar to the aversive context during recall. Beyond this similarity increase, we provide evidence for a higher-dimensional geometric transformation consistent with a shared "fear" operation that can be applied across contexts while preserving their identity. Crucially, these two representational signatures dissociate by behavioral state: similarity to the aversive context emerges during freezing, whereas a shared transformation is expressed during active exploration. Together, these findings demonstrate that hippocampal representations support retrospective fear generalization through state-dependent geometric transformations, highlighting representational geometry as a key computational mechanism to resolve the apparent tension between generalization and discriminability.

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Chen, H.-T., Zaki, Y., Cai, D. J., van der Meer, M. A.. 2026-05-05. State-dependent geometric transformations in the mouse hippocampus support fear generalization without loss of discriminability. https://doi.org/10.64898/2026.05.01.722221

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