Network of Interactions between the Tumor Necrosis Factor Superfamily Members and Small S100 Proteins

Rastrygina, V. A.; Deryusheva, E. I.; Kazakov, A. S.; Sokolov, A. S.; Permyakova, M. E.; Litus, E. A.; Uversky, V. N.; Permyakov, E. A.; Permyakov, S. E.

doi:10.64898/2026.01.08.698460

bioRxiv · 10.64898/2026.01.08.698460

Network of Interactions between the Tumor Necrosis Factor Superfamily Members and Small S100 Proteins

Rastrygina, V. A.·Deryusheva, E. I.·Kazakov, A. S.·Sokolov, A. S.·Permyakova, M. E.·Litus, E. A.·Uversky, V. N.·Permyakov, E. A.·Permyakov, S. E.

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Abstract

Tumor Necrosis Factor Superfamily (TNFSF) comprises 20 members of membrane/soluble signaling proteins regulating cell survival, cell proliferation/differentiation, and innate/adaptive immunity. Targeting signaling of TNFSF members is used clinically to treat several autoimmune and oncological diseases, and bone loss. They and their cognate receptors are in clinical trials as targets for treatment of autoimmune, inflammatory, oncological and other diseases. Recently, some representatives of S100 family of pleiotropic calcium-binding proteins were shown to interact with TNFSF members TNF and TRAIL, thereby suppressing their activity. In this work, we explored selectivity of interactions between soluble forms of 13 TNFSF members and 21 non-fused S100 proteins using surface plasmon resonance spectroscopy. A total of 27 interactions were found between CD70, CD30L, 4-1BBL, TWEAK, APRIL, LIGHT, VEGI and AITRL and Ca2+-loaded forms of S100A1/A2/A4/A5/A6/A12/A16/B/P proteins, with equilibrium dissociation constants from 2 nM to 24 M. Removal of calcium leads to disruption of the interactions. Molecular docking indicates presence of well-conserved binding sites of the both interaction partners. Mutagenesis of S100P evidences involvement of its hinge region in binding of CD30L, VEGI and AITRL, as well as F89 residue in VEGI recognition. The revealed network of interactions is potentially important for regulation of the cellular communication mediated by TNFSF/S100 proteins, which could be exploited for targeted therapy of socially significant diseases.

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Rastrygina, V. A., Deryusheva, E. I., Kazakov, A. S., Sokolov, A. S., Permyakova, M. E., Litus, E. A., Uversky, V. N., Permyakov, E. A., Permyakov, S. E.. 2026-01-08. Network of Interactions between the Tumor Necrosis Factor Superfamily Members and Small S100 Proteins. https://doi.org/10.64898/2026.01.08.698460

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