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bioRxiv · 10.1101/844522

A comprehensive online database for exploring ~20,000 public Arabidopsis RNA-Seq libraries

Zhang, H.·Zhang, F.·Feng, L.·Jia, J.·Zhai, J.
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Abstract

Application of Next Generating Sequencing (NGS) technology in transcriptome profiling has greatly improved our understanding of transcriptional regulation at genome-wide scale in the last decade, and tens of thousands of RNA-sequencing (RNA-seq) libraries have been produced by the research community. However, accessing such huge amount of RNA-seq data poses a big challenge for groups that lack dedicated bioinformatic personnel or expensive computational resources. Here, we introduce the Arabidopsis RNA-seq database (ARS), a free, web-accessible, and user-friendly to quickly explore expression level of any gene in 20,000+ publicly available Arabidopsis RNA-seq libraries.

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Zhang, H., Zhang, F., Feng, L., Jia, J., Zhai, J.. 2019-11-18. A comprehensive online database for exploring ~20,000 public Arabidopsis RNA-Seq libraries. https://doi.org/10.1101/844522

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