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bioRxiv · 10.1101/733238

quasitools: A Collection of Tools for Viral Quasispecies Analysis

Marinier, E.·Enns, E.·Tran, C.·Fogel, M.·Peters, C.·Kidwai, A.·Ji, H.·Van Domselaar, G.
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Abstract

Summaryquasitools is a collection of newly-developed, open-source tools for analyzing viral quasispcies data. The application suite includes tools with the ability to create consensus sequences, call nucleotide, codon, and amino acid variants, calculate the complexity of a quasispecies, and measure the genetic distance between two similar quasispecies. These tools may be run independently or in user-created workflows.\n\nAvailabilityThe quasitools suite is a freely available application licensed under the Apache License, Version 2.0. The source code, documentation, and file specifications are available at: https://phac-nml.github.io/quasitools/\n\nContactgary.vandomselaar@canada.ca

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Marinier, E., Enns, E., Tran, C., Fogel, M., Peters, C., Kidwai, A., Ji, H., Van Domselaar, G.. 2019-08-13. quasitools: A Collection of Tools for Viral Quasispecies Analysis. https://doi.org/10.1101/733238

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