MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation

Tournier, J.-D.; Smith, R. E.; Raffelt, D. A.; Tabbara, R.; Dhollander, T.; Pietsch, M.; Christiaens, D.; Jeurissen, B.; Yeh, C.-H.; Connelly, A.

doi:10.1101/551739

bioRxiv · 10.1101/551739

MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation

Tournier, J.-D.·Smith, R. E.·Raffelt, D. A.·Tabbara, R.·Dhollander, T.·Pietsch, M.·Christiaens, D.·Jeurissen, B.·Yeh, C.-H.·Connelly, A.

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Abstract

MRtrix3 is an open-source, cross-platform software package for medical image processing, analysis and visualization, with a particular emphasis on the investigation of the brain using diffusion MRI. It is implemented using a fast, modular and flexible general-purpose code framework for image data access and manipulation, enabling efficient development of new applications, whilst retaining high computational performance and a consistent command-line interface between applications. In this article, we provide a high-level overview of the features of the MRtrix3 framework and general-purpose image processing applications provided with the software.

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Tournier, J.-D., Smith, R. E., Raffelt, D. A., Tabbara, R., Dhollander, T., Pietsch, M., Christiaens, D., Jeurissen, B., Yeh, C.-H., Connelly, A.. 2019-02-15. MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation. https://doi.org/10.1101/551739

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