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bioRxiv · 10.1101/235820

bioSyntax: Syntax Highlighting For Computational Biology

Babaian, A.·Ebou, A.·Fegen, A.·Kam, H. Y. J.·Novakovsky, G. E.·Wong, J.
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Abstract

Computational biology requires the reading and comprehension of biological data files. Plain-text formats such as SAM, VCF, GTF, PDB and FASTA, often contain critical information that is obfuscated by the complexity of the data structures. bioSyntax (http://bioSyntax.org) is a freely available suite of syntax highlighting packages for vim, gedit, Sublime, and less, which aids computational scientists to parse and work with their data more efficiently.

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Babaian, A., Ebou, A., Fegen, A., Kam, H. Y. J., Novakovsky, G. E., Wong, J.. 2017-12-20. bioSyntax: Syntax Highlighting For Computational Biology. https://doi.org/10.1101/235820

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