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bioRxiv · 10.1101/2025.10.20.683564

Investigating Overflow Metabolism in Heterotrophic Cultures of the Green Alga Chromochloris zofingiensis

Meagher, M. F.·Camacho, D.·Gallaher, S.·Merchant, S.·Boyle, N.
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Abstract

Chromochloris zofingiensis is of interest for its ability to perform a reversible trophic switch in the presence of glucose that is characterized by a shutdown of photosynthesis and an accumulation of energy storage metabolites. Previous work has shown that this trophic switch is accompanied by overflow metabolism and the production of lactate in aerobic conditions. This trophic switch is not observed in nutrient replete media. We utilized isotopically assisted metabolic flux analysis to characterize intracellular flux distributions that are associated with different metabolic phenotypes observed in this organism in different media formulations in light and dark conditions. The results of this analysis showed differences in flux through carbon fixation reactions, the TCA cycle and through the reaction catalyzed by pyruvate kinase. This analysis was complemented with transcriptomics data collected for C. zofingiensis grown in iron limited conditions to provide further evidence towards the negative impact of iron limitation on both photosynthetic and respiratory activity. Overflow metabolism allows this alga to compensate for the lower energy production that results from iron limitation. This work highlights how nutrient availability can lead to drastic changes in the metabolism of C. zofingiensis.

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Meagher, M. F., Camacho, D., Gallaher, S., Merchant, S., Boyle, N.. 2025-10-21. Investigating Overflow Metabolism in Heterotrophic Cultures of the Green Alga Chromochloris zofingiensis. https://doi.org/10.1101/2025.10.20.683564

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