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bioRxiv · 10.1101/2025.09.11.675556

SIMple: A fibre-based platform for accessible structured illumination microscopy

McClelland, R. M.·Ward, E. N.·van Tartwijk, F. W.·Devlin, S.·Wang, J.·Kaminski, C. F.
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Abstract

Structured illumination microscopy can be used to achieve optical sectioning and super resolution in fluorescence images, reducing out-of-focus light and increasing the resolution beyond the diffraction limit, without the need for specialised detection optics. However, the complex illumination path is difficult to build and align. We present an illumination path based on fibre-optic components for both splitting and phase-shifting the illumination light. This enables a SIMple and compact "Plug&Play" modality which substantially reduces the time and alignment required when adding the optics to an existing widefield instrument. The system is capable of optical sectioning imaging at camera-limited frame-rates using multiple excitation wavelengths simultaneously, as demonstrated by imaging fixed and live biological samples at 561 and 491 nm. Super-resolution imaging of fixed samples on a very compact, self-contained microscope is also demonstrated: illumination is coupled in by fibre to a lightweight frame with dimensions of just 300 x 450 x 300 mm3, enabling easy transportation and use in laboratories with limited space. Characterisation of the system using bead analysis shows a resolution of 168 and 172 nm at 491 and 561 nm, respectively, an improvement by a factor of 1.91 and 1.92 compared to widefield, with a field of view of 100 x 100 {micro}m2.

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McClelland, R. M., Ward, E. N., van Tartwijk, F. W., Devlin, S., Wang, J., Kaminski, C. F.. 2025-09-16. SIMple: A fibre-based platform for accessible structured illumination microscopy. https://doi.org/10.1101/2025.09.11.675556

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