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bioRxiv · 10.1101/2025.08.18.670823

Degradation of biopesticidal triterpenoid saponins by the soil bacterium Arthrobacter sp. α-11c

Nicolaisen, M.·Molina-Zamudio, K. Y.·Dervishi, M.·Wang, C.·Rami, M.·Browne, P. D.·Hansen, H. C. B.·Bak, S.
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Abstract

BackgroundSaponins, a diverse group of glycosylated triterpenoid and steroid compounds produced by plants, exhibit potent insecticidal activity and are promising candidates for sustainable pest management. However, their potential persistence in soil raises concerns about ecological impacts, highlighting the need to understand microbial degradation rates and pathways. ResultsThis study reports the isolation of Arthrobacter sp. 11c, and its ability of fully degrading two hederagenin-based pentacyclic triterpenoid saponins: -hederin, hederacoside C, and the corresponding sapogenin hederagenin. All three compounds were fully metabolized within six hours when provided as carbon source. Fractionation experiments confirmed intracellular uptake and degradation of the saponins. Genome analysis of 11c revealed diverse and multiple glycosidase genes, yet basal glucosidase activity remained unchanged when cultured with these saponins. Comparative genomics with Arthrobacter sp. 12b, a closely related strain unable to degrade saponins, revealed two unique glycosidase gene clusters in 11c, suggesting a role in adaptation to saponin metabolism. ConclusionThese findings enhance our understanding of bacterial degradation of plant triterpenoid saponins and provide a foundation for evaluating their environmental fate. This knowledge supports the safe and sustainable use of saponin-based biopesticides in agriculture by identifying microbial partners that contribute to their breakdown in soil ecosystems.

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Nicolaisen, M., Molina-Zamudio, K. Y., Dervishi, M., Wang, C., Rami, M., Browne, P. D., Hansen, H. C. B., Bak, S.. 2025-08-18. Degradation of biopesticidal triterpenoid saponins by the soil bacterium Arthrobacter sp. α-11c. https://doi.org/10.1101/2025.08.18.670823

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