bioRxiv Science⌕ Search

bioRxiv · 10.1101/2025.07.14.664264

A plant pathogen effector blocks stepwise assembly of a helper NLR resistosome

Abstract

Helper NLRs function as central nodes in plant immune networks. Upon activation, they oligomerize into inflammasome-like resistosomes to initiate immune signaling, yet the dynamics of resistosome assembly remain poorly understood. Here, we show that the virulence effector AVRcap1b from the Irish potato famine pathogen Phytophthora infestans suppresses immune activation by directly engaging oligomerization intermediates of the tomato helper NLR SlNRC3. Cryo-EM structures of SlNRC3 in AVRcap1b-bound and unbound states reveal that AVRcap1b bridges multiple protomers, stabilizing a stalled intermediate and preventing formation of a functional resistosome. Leveraging AVRcap1b as a molecular tool, we also capture an additional SlNRC3 resistosome intermediate showing that assembly proceeds in a stepwise manner from dissociated monomers. These findings uncover a previously unrecognized vulnerability in NLR activation and reveal a pathogen strategy that disrupts immune complex assembly. This work advances mechanistic understanding of resistosome formation and uncovers a previously unrecognized facet of pathogen-plant coevolution.

Source connections

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Seager, B. A., Harant, A., Contreras, M. P., Hou, L.-Y., Wu, C.-H., Kamoun, S., Madhuprakash, J.. 2025-07-14. A plant pathogen effector blocks stepwise assembly of a helper NLR resistosome. https://doi.org/10.1101/2025.07.14.664264

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

Large seed size accompanying GmSDP1 suppression is linked to cellular remodeling and phytohormone regulation

Soybean (Glycine max) seeds contain approximately 20% oil and 40% protein and are important for food, feed, and biofuel. Improving soybean productivity and seed quality requires optimizing carbon partitioning during seed development. Previously, seed-specific suppression of the lipase-encoding gene Sugar-Dependent 1 (SDP1) increased seed oil content by approximately 5% while slightly reducing raffinose family oligosaccharides without compromising protein content. Seed-specific SDP1 suppression also increased seed size by 18-25% without affecting seed number, resulting in greater seed biomass per plant. To determine the developmental basis of the increased seed size, we investigated the cellular and molecular mechanisms underlying this phenotype. Microscopy and biochemical analyses showed that larger seeds were associated with increased seed cell size and enhanced lignocellulosic cell wall accumulation. Temporal biochemical and transcriptomic analyses further revealed coordinated changes in hormone homeostasis, including altered levels of abscisic acid, 12-oxo-phytodienoic acid, and jasmonoyl-isoleucine, together with differential expression of F-box and RING/U-box family genes. The results indicate that the enhanced seed size resulting from SDP1 suppression is associated with coordinated changes in cellular development, cell wall accumulation, hormone homeostasis, and regulation of gene expression during seed development. Developmental and metabolic changes associated with the increased seed size phenotype support SDP1 manipulation as a potential strategy for improving soybean seed yield and quality.

plant biology↗

Growth, yield, and quality of hot pepper (Capsicum annuum L.) as affected by the combined application of liquid bio-slurry and NPS fertilizer rates in Kucha, Gamo zone, south Ethiopia

Hot pepper (Capsicum annuum L.) is a key cash and nutritional crop in Ethiopia, yet its productivity remains constrained by inadequate and imbalanced soil nutrient management. Therefore, the field experiment was conducted in Kucha woreda, Gamo Zone, South Ethiopia, during the 2024/25 cropping season to investigate the effect of liquid bio-slurry and NPS fertilizer rates on growth, yield and quality of hot pepper. The experiment consisted of 16 treatments arranged in a factorial combination of four liquid bio-slurry (LBS) rates (0, 20, 40, and 60 m3 ha-1) and four NPS fertilizer rates (0, 75, 150, and 225 kg ha-1) using a randomized complete block design with three replications. All experimental data were collected following standard agronomic procedures and subjected to analysis of variance using GenStat statistical software (18th edition). The results revealed that both the main and interaction effects of liquid bio-slurry and NPS significantly (p < 0.01) influenced phenological, growth, yield, and quality parameters. The combined application of 150 kg ha-1 NPS and 60 m3 ha-1 LBS produced the highest marketable dry fruit yield (2.94 t ha-1) and total dry fruit yield (3.16 t ha-1), representing a 129.69% yield advantage over the control (1.28 t ha-1) in the case of marketable dry fruit yield. The findings demonstrate that integrated nutrient management using combined LBS and NPS fertilizers significantly enhanced the productivity and quality of hot pepper. Therefore, the application of 150 kg ha-1 NPS combined with 60 m3 ha-1 liquid bio-slurry is recommended for improved hot pepper production for the study area and similar agro-ecological conditions.

plant biology↗

Higher stomatal density and smaller stomatal size associate with higher grain yield in winter wheat

In wheat (Triticum aestivum L.), flag leaf is crucial in determining grain-filling rate and final grain yield. Stomata, microscopic pores on plant surfaces, balance CO2 uptake and evaporative water loss; their numbers and aperture sizes depend on environmental factors. Previous studies have reported associations between stomatal traits and grain yield; mostly under controlled conditions. Our study aimed to investigate flag leaf stomatal anatomical and physiological traits, and their relationships with winter wheat grain yield under field conditions. We measured stomatal density and size, and stomatal conductance on adaxial and abaxial flag leaf surfaces in a three-year field study with twenty-five winter wheat varieties. Stomatal density ratio remained constant despite different stomatal densities occurring in different years, indicating coordinated adjustments of stomatal numbers between leaf surfaces in response to environmental conditions. Stomatal conductance ratios varied widely, indicating leaf-surface specific stomatal responses to environmental conditions. Grain yield was positively associated with stomatal density and negatively with stomatal size. Flag leaf removal reduced grain weight per spike and did not affect grain numbers per spike, unlike in spring wheat. Our field study provides valuable insights into the relationships between winter wheat stomatal traits and grain yield that can be used in breeding.

plant biology↗