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bioRxiv · 10.1101/2025.07.07.663543

Precision Functional Mapping of the Individual Human Brain Near Birth

Labonte, A. K.·Moser, J.·Camacho, M. C.·Tu, J. C.·Wheelock, M.·Laumann, T. O.·Gordon, E. M.·Fair, D. A.·Sylvester, C.
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Abstract

Cortical areas are a fundamental organizational property of the brain, but their development in humans is not well understood. Key unanswered questions include whether cortical areas are fully established near birth, the extent of individual variation in the arrangement of cortical areas, and whether any such individual variation in cortical area location is greater in later-developing association areas as compared to earlier-developing sensorimotor areas. To address these questions, we used functional MRI to collect precision functional mapping (PFM) data in eight individual neonates (mean 42.7 weeks postmenstrual age) over 2-5 days (mean 77.9 minutes of low motion data per subject [framewise displacement <0.1]). Each subjects dataset was split into two roughly equal halves of data from different days of data collection to measure within-subject reliability and across-subject similarity. Whole-brain patterns of functional connectivity (FC) reached a mean within-subject, across-day reliability of r=0.78 with 41.9 minutes of data. Across subject similarity of whole-brain FC was r=0.62 on average and significantly lower than within-subject similarity (t=5.9, p<0.001). Using established methods to identify transitions in FC across the cortical surface, we identified sets of cortical areas for each individual that were subject-specific and highly reliable across split-halves (mean z=4.4, SD=1.4). The arrangement of cortical areas was thus individually specific across the entire cortical surface, and this individual specificity did not vary as a function of the sensorimotor-association axis. This study establishes the feasibility of neonatal PFM and suggests that cortical area arrangement is individually specific and largely established shortly following birth. GRAPHICAL ABSTRACT O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=80 SRC="FIGDIR/small/663543v1_ufig1.gif" ALT="Figure 1"> View larger version (31K): org.highwire.dtl.DTLVardef@b6c63aorg.highwire.dtl.DTLVardef@1903235org.highwire.dtl.DTLVardef@1d05733org.highwire.dtl.DTLVardef@10d0770_HPS_FORMAT_FIGEXP M_FIG C_FIG HIGHLIGHTSO_LIIt is feasible to obtain precision functional mapping (PFM) in neonates, acquiring 60+ minutes of fMRI data in individual neonates over multiple days. C_LIO_LINeonatal functional connectivity (FC) measures obtained through PFM are moderately reliable with 40 minutes of data. C_LIO_LIPatterns of neonatal FC across the brain are individually specific. C_LIO_LICortical areas, based on patterns of homogenous FC, can be reliably identified across the entire cortical surface in individual neonates. C_LIO_LIThe arrangement of cortical areas at birth is individually specific across the entire brain. C_LI

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Labonte, A. K., Moser, J., Camacho, M. C., Tu, J. C., Wheelock, M., Laumann, T. O., Gordon, E. M., Fair, D. A., Sylvester, C.. 2025-07-10. Precision Functional Mapping of the Individual Human Brain Near Birth. https://doi.org/10.1101/2025.07.07.663543

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