A novel AAA+ ATPase required for sporulation and stress response in Bacillus anthracis

Sangwan, N.; Bothra, A.; Pomerantsev, A. P.; Gangwal, A.; Fattah, R.; Moayeri, M.; Ma, Q.; Ganesan, S.; Keshavam, C. C.; Baweja, R.; Dhawan, U.; Leppla, S. H.; Singh, Y.

doi:10.1101/2025.06.16.659970

bioRxiv · 10.1101/2025.06.16.659970

A novel AAA+ ATPase required for sporulation and stress response in Bacillus anthracis

Sangwan, N.·Bothra, A.·Pomerantsev, A. P.·Gangwal, A.·Fattah, R.·Moayeri, M.·Ma, Q.·Ganesan, S.·Keshavam, C. C.·Baweja, R.·Dhawan, U.·Leppla, S. H.·Singh, Y.

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Abstract

AAA+ proteins function as molecular machines that utilize ATP to perform diverse cellular functions, including protein homeostasis, stress regulation, and cell cycle/developmental processes. In this study, we identified a novel AAA+ ATPase BAS PrkA in B. anthracis Sterne 34F2 which has 88 % protein homology to Bacillus subtilis PrkA. Conserved domain analysis confirms BAS PrkA has an N-terminal AAA+ ATPase domain with characteristic Walker A and Walker B motifs and a conserved secondary region of homology (SRH) domain, along with a C-terminal cAMP-dependent protein kinase domain. Based on Alpha Fold3 predicted structure, we classified BAS PrkA as part of Clade III of the AAA+ superfamily. Contrary to the reported enzymatic activity in B. subtilis PrkA, we observed that BAS PrkA has negligible protease and kinase activity under in-vitro conditions. Nonetheless, BAS PrkA plays a significant role in regulating sporulation. It is temporally expressed during Stages II to VI during sporulation. A null mutant of BAS PrkA exhibits severe sporulation defects, with reduced spore viability, and down regulation of genes related to spore-coat formation. These phenotypes were restored in a complementation strain expressing BAS PrkA ectopically. Additionally, the null mutant strain showed compromised growth under ionic-osmotic stress conditions. Analysis of the BAS PrkA interactome revealed enrichment of two proteins, ProA and EzrA, that are implicated in osmotic stress response and the sporulation process, respectively. These findings show that BAS PrkA plays a critical role in sporulation and osmotic stress response in B. anthracis.

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Sangwan, N., Bothra, A., Pomerantsev, A. P., Gangwal, A., Fattah, R., Moayeri, M., Ma, Q., Ganesan, S., Keshavam, C. C., Baweja, R., Dhawan, U., Leppla, S. H., Singh, Y.. 2025-06-16. A novel AAA+ ATPase required for sporulation and stress response in Bacillus anthracis. https://doi.org/10.1101/2025.06.16.659970

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