Development of Potent, Selective cPLA2 Inhibitors for Targeting Neuroinflammation in Alzheimer's Disease and Other Neurodegenerative Disorders

Sadybekov, A. V.; Duro, M. V.; Wang, S.; Ebright, B.; Dikeman, D.; Hugo, C.; Kerman, B. E.; Ma, Q.-L.; Nazarova, A. L.; Sadybekov, A. A.; Asante, I.; Louie, S. G.; Katritch, V.; Yassine, H. N.

doi:10.1101/2025.03.09.641748

bioRxiv · 10.1101/2025.03.09.641748

Development of Potent, Selective cPLA2 Inhibitors for Targeting Neuroinflammation in Alzheimer's Disease and Other Neurodegenerative Disorders

Sadybekov, A. V.·Duro, M. V.·Wang, S.·Ebright, B.·Dikeman, D.·Hugo, C.·Kerman, B. E.·Ma, Q.-L.·Nazarova, A. L.·Sadybekov, A. A.·Asante, I.·Louie, S. G.·Katritch, V.·Yassine, H. N.

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Abstract

Chronic neuroinflammation plays a key role in the progression of Alzheimers disease (AD), and the cytosolic calcium-dependent phospholipase A2 (cPLA2) enzyme is a critical mediator of inflammatory lipid signaling pathways. Here we investigate the therapeutic potential of novel cPLA2 inhibitors in modulating neuroinflammation in AD. By leveraging the giga-scale V-SYNTHES 2.0 virtual screening in on-demand chemical space and conducting two rounds of optimization for potency and selectivity, we have identified BRI-50460, achieving an IC50 of 0.88 nM in cellular assays of cPLA2 activity. In vivo studies revealed favorable brain-to-plasma ratios, highlighting the ability of BRI-50460 to penetrate the central nervous system, potentially modulating neuroinflammatory pathways and restoring lipid homeostasis. In cultured astrocytes and neurons derived from human induced pluripotent stem cells, BRI-50460 mitigates the effects of amyloid beta 42 oligomers on cPLA2 activation, tau hyperphosphorylation, and synaptic and dendritic reduction. Our results suggest that small molecule inhibitors of the cPLA2 enzyme can modulate the downstream inflammatory lipid signaling pathways, offering a promising therapeutic strategy for AD and other neurodegenerative diseases.

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Sadybekov, A. V., Duro, M. V., Wang, S., Ebright, B., Dikeman, D., Hugo, C., Kerman, B. E., Ma, Q.-L., Nazarova, A. L., Sadybekov, A. A., Asante, I., Louie, S. G., Katritch, V., Yassine, H. N.. 2025-03-11. Development of Potent, Selective cPLA2 Inhibitors for Targeting Neuroinflammation in Alzheimer's Disease and Other Neurodegenerative Disorders. https://doi.org/10.1101/2025.03.09.641748

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