Alternative splicing broadens antiviral diversity at the human OAS2 locus

Davies, E. L.; Sowar, H.; Balci, A.; Moorhouse, E.; Wickenhagen, A.; Turnbull, M. L.; Palmarini, M.; Wilson, S. J.; Fletcher, A. J.

doi:10.1101/2025.02.24.639105

bioRxiv · 10.1101/2025.02.24.639105

Alternative splicing broadens antiviral diversity at the human OAS2 locus

Davies, E. L.·Sowar, H.·Balci, A.·Moorhouse, E.·Wickenhagen, A.·Turnbull, M. L.·Palmarini, M.·Wilson, S. J.·Fletcher, A. J.

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Abstract

Interferons (IFN) are cytokines that regulate the expression of hundreds of genes during viral infections to generate a broadly antiviral environment in the stimulated cell. Antiviral breadth is provided by the concurrent expression of many individual IFN-stimulated genes (ISG), each encoding a protein with often exquisite antiviral specificity. Here, we show that mechanistic plasticity at a single genetic locus is a novel mechanism to diversify the antiviral profile of human cells. Through alternative splicing, the OAS2 gene encodes two antiviral molecules with distinct target specificities. The shorter OAS2 p69 isoform blocks the replication of seasonal human coronavirus OC43 (HCoV-OC43), while the longer p71 isoform restricts the replication of picornavirus Cardiovirus A (EMCV). The restriction profile is determined by the variable length OAS2 C-terminal tail. Remarkably, the antiviral mechanisms underlying these distinct antiviral profiles are either RNase L dependent or independent, suggesting that splicing divides classic restriction versus virus sensing systems across two distinct OAS2 polypeptides. Together, our data reveal that the human OAS2 locus uses alternative splicing and mechanistic plasticity to diversify antiviral profiles.

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Davies, E. L., Sowar, H., Balci, A., Moorhouse, E., Wickenhagen, A., Turnbull, M. L., Palmarini, M., Wilson, S. J., Fletcher, A. J.. 2025-02-24. Alternative splicing broadens antiviral diversity at the human OAS2 locus. https://doi.org/10.1101/2025.02.24.639105

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