Incorporating histone H2B variants into chromatin modifies chromatin accessibility to induce epithelial to mesenchymal transition in breast cancer

Dhahri, H.; Lau, K. H.; Saintilnord, W. N.; Lopes, E.; Damico, H. N.; Palma, F. R.; Melters, D. P.; Chandler, D. P.; Dalal, Y.; Licht, J. D.; Bonini, M. G.; Fondufe-Mittendorf, Y.

doi:10.1101/2024.12.21.627414

bioRxiv · 10.1101/2024.12.21.627414

Incorporating histone H2B variants into chromatin modifies chromatin accessibility to induce epithelial to mesenchymal transition in breast cancer

Dhahri, H.·Lau, K. H.·Saintilnord, W. N.·Lopes, E.·Damico, H. N.·Palma, F. R.·Melters, D. P.·Chandler, D. P.·Dalal, Y.·Licht, J. D.·Bonini, M. G.·Fondufe-Mittendorf, Y.

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Abstract

Histones scaffold genomic DNA and regulate access to the transcriptional machinery. However, naturally occurring histone variants can alter histone-DNA interactions, DNA and histone modifications, and the chromatin interactome. Hence, alterations in histone variant deposition can disrupt chromatin, and are increasingly recognized as a way to trigger various disease, including cancer. While significant attention has been placed on the biochemical and functional roles of H2A, H3, and H4 histone variants, the variants of H2B remain largely understudied. Here, we show that H2B variants are dysregulated in breast cancer and that certain variants are associated with specific breast cancer subtypes. HIST1H2BO overexpression (in particular) is more common in Asian, African American/Black, and young female populations and is associated with a worse prognosis. In vitro studies show that H2B1O compacts nucleosome structure. Incorporating H2B1O into chromatin activates pro-inflammatory and oncogenic pathways, induces the epithelial-to-mesenchymal transition (EMT), and generates resistance to first-line chemotherapeutic agents. Thus, H2B1O acts much like an onco-histone, with H2B variant expression being a prognostic biomarker for breast cancer and a potential new target for drug therapies to enhance treatment efficacy. Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=200 SRC="FIGDIR/small/627414v1_ufig1.gif" ALT="Figure 1"> View larger version (106K): org.highwire.dtl.DTLVardef@12c21dcorg.highwire.dtl.DTLVardef@631f3aorg.highwire.dtl.DTLVardef@1972244org.highwire.dtl.DTLVardef@14ab3b1_HPS_FORMAT_FIGEXP M_FIG C_FIG

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Dhahri, H., Lau, K. H., Saintilnord, W. N., Lopes, E., Damico, H. N., Palma, F. R., Melters, D. P., Chandler, D. P., Dalal, Y., Licht, J. D., Bonini, M. G., Fondufe-Mittendorf, Y.. 2024-12-21. Incorporating histone H2B variants into chromatin modifies chromatin accessibility to induce epithelial to mesenchymal transition in breast cancer. https://doi.org/10.1101/2024.12.21.627414

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