Solution biophysics identifies lipid nanoparticle non-sphericity, polydispersity, and dependence on internal ordering for efficacious mRNA delivery

Padilla, M.; Shepherd, S. J.; Hanna, A. R.; Kurnik, M.; Zhang, X.; Chen, M.; Byrnes, J.; Yamagata, H.; Ricciardi, A.; Joseph, R.; Mrksich, K.; Issadore, D.; Gupta, K.; Mitchell, M.

doi:10.1101/2024.12.19.629496

bioRxiv · 10.1101/2024.12.19.629496

Solution biophysics identifies lipid nanoparticle non-sphericity, polydispersity, and dependence on internal ordering for efficacious mRNA delivery

Padilla, M.·Shepherd, S. J.·Hanna, A. R.·Kurnik, M.·Zhang, X.·Chen, M.·Byrnes, J.·Yamagata, H.·Ricciardi, A.·Joseph, R.·Mrksich, K.·Issadore, D.·Gupta, K.·Mitchell, M.

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Abstract

Designing lipid nanoparticle (LNP) delivery systems with specific targeting, potency and minimal side effects is crucial for their clinical use. However, traditional characterization methods, such as dynamic light scattering, cannot accurately quantify physicochemical properties of LNPs and how they are influenced by the lipid composition and mixing method. Here we structurally characterize polydisperse LNP formulations by applying emerging solution-based biophysical methods that have higher resolution and provide biophysical data beyond size and polydispersity. These techniques include sedimentation velocity analytical ultracentrifugation, field-flow fractionation followed by multi-angle light scattering, and size-exclusion chromatography in-line with synchrotron small-angle X-ray scattering. We show that LNPs have intrinsic polydispersity in size, RNA loading, and shape, which depends on both the formulation technique and lipid composition. Lastly, we predict LNP transfection in vitro and in vivo by examining the relationship between mRNA translation and physicochemical characteristics. Solution-based biophysical methods will be essential for determining LNP structure-function relationships, facilitating the creation of new design rules for LNPs.

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Padilla, M., Shepherd, S. J., Hanna, A. R., Kurnik, M., Zhang, X., Chen, M., Byrnes, J., Yamagata, H., Ricciardi, A., Joseph, R., Mrksich, K., Issadore, D., Gupta, K., Mitchell, M.. 2024-12-22. Solution biophysics identifies lipid nanoparticle non-sphericity, polydispersity, and dependence on internal ordering for efficacious mRNA delivery. https://doi.org/10.1101/2024.12.19.629496

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