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bioRxiv · 10.1101/2024.12.17.628905

The PRMT5-splicing axis is a critical oncogenic vulnerability that regulates detained intron splicing

Fowler, C. E.·O'Hearn, N. A.·Salus, G. J.·Singh, A.·Boutz, P. L.·Lees, J. A.
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Abstract

Protein arginine methyltransferase 5 (PRMT5) is a promising cancer target, yet its unclear which PRMT5 roles underlie this vulnerability. Here, we establish that PRMT5 inhibition induces a special class of unspliced introns, called detained introns (DIs). To interrogate the impact of DIs, we depleted CLNS1A, a PRMT5 cofactor that specifically enables Sm protein methylation. We found that many, but not all, cell lines are CLNS1A-dependent and established that loss of viability is linked to loss of Sm protein methylation and DI upregulation. Finally, we discovered that PRMT5-regulated DIs, and the impacted genes, are highly conserved across human, and also mouse, cell lines but display little interspecies conservation. Despite this, human and mouse DIs have convergent impacts on proliferation by affecting essential components of proliferation-regulating complexes. Together, these data argue that the PRMT5-splicing axis, including appropriate DI splicing, underlies cancers vulnerability to PRMT5 inhibitors.

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Fowler, C. E., O'Hearn, N. A., Salus, G. J., Singh, A., Boutz, P. L., Lees, J. A.. 2024-12-20. The PRMT5-splicing axis is a critical oncogenic vulnerability that regulates detained intron splicing. https://doi.org/10.1101/2024.12.17.628905

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