Integrated systems biology identifies disruptions in mitochondrial function and metabolism as key contributors to heart failure with preserved ejection fraction (HFpEF)

Gibb, A. A.; LaPenna, K. B.; Gaspar, R. B.; Latchman, N. R.; Tan, Y. F.; Choya-Foces, C.; Doiron, J. E.; Li, Z.; Xia, H.; Lazaropoulos, M. P.; Conwell, M.; Sharp, T. E.; Goodchild, T. T.; Lefer, D. J.; Elrod, J. W.

doi:10.1101/2024.10.25.619450

bioRxiv · 10.1101/2024.10.25.619450

Integrated systems biology identifies disruptions in mitochondrial function and metabolism as key contributors to heart failure with preserved ejection fraction (HFpEF)

Gibb, A. A.·LaPenna, K. B.·Gaspar, R. B.·Latchman, N. R.·Tan, Y. F.·Choya-Foces, C.·Doiron, J. E.·Li, Z.·Xia, H.·Lazaropoulos, M. P.·Conwell, M.·Sharp, T. E.·Goodchild, T. T.·Lefer, D. J.·Elrod, J. W.

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Abstract

BackgroundHeart failure with preserved ejection fraction (HFpEF) accounts for [~]50% of HF cases, with no effective treatments. The ZSF1-obese rat model recapitulates numerous clinical features of HFpEF including hypertension, obesity, metabolic syndrome, exercise intolerance, and LV diastolic dysfunction. Here, we utilized a systems-biology approach to define the early metabolic and transcriptional signatures to gain mechanistic insight into the pathways contributing to HFpEF development. MethodsMale ZSF1-obese, ZSF1-lean hypertensive controls, and WKY (wild-type) controls were compared at 14w of age for extensive physiological phenotyping and LV tissue harvesting for unbiased metabolomics, RNA-sequencing, and assessment of mitochondrial morphology and function. Utilizing ZSF1-lean and WKY controls enabled a distinction between hypertension-driven molecular changes contributing to HFpEF pathology, versus hypertension + metabolic syndrome. ResultsZSF1-obese rats displayed numerous clinical features of HFpEF. Comparison of ZSF1-lean vs WKY (i.e., hypertension-exclusive effects) revealed metabolic remodeling suggestive of increased aerobic glycolysis, decreased {beta}-oxidation, and dysregulated purine and pyrimidine metabolism with few transcriptional changes. ZSF1-obese rats displayed worsened metabolic remodeling and robust transcriptional remodeling highlighted by the upregulation of inflammatory genes and downregulation of the mitochondrial structure/function and cellular metabolic processes. Integrated network analysis of metabolomic and RNAseq datasets revealed downregulation of nearly all catabolic pathways contributing to energy production, manifesting in a marked decrease in the energetic state (i.e., reduced ATP/ADP, PCr/ATP). Cardiomyocyte ultrastructure analysis revealed decreased mitochondrial area, size, and cristae density, as well as increased lipid droplet content in HFpEF hearts. Mitochondrial function was also impaired as demonstrated by decreased substrate-mediated respiration and dysregulated calcium handling. ConclusionsCollectively, the integrated omics approach applied here provides a framework to uncover novel genes, metabolites, and pathways underlying HFpEF, with an emphasis on mitochondrial energy metabolism as a potential target for intervention.

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Gibb, A. A., LaPenna, K. B., Gaspar, R. B., Latchman, N. R., Tan, Y. F., Choya-Foces, C., Doiron, J. E., Li, Z., Xia, H., Lazaropoulos, M. P., Conwell, M., Sharp, T. E., Goodchild, T. T., Lefer, D. J., Elrod, J. W.. 2024-10-25. Integrated systems biology identifies disruptions in mitochondrial function and metabolism as key contributors to heart failure with preserved ejection fraction (HFpEF). https://doi.org/10.1101/2024.10.25.619450

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