bioRxiv Science⌕ Search

bioRxiv · 10.1101/2024.10.10.617686

The Xenopus respiratory system reveals common tetrapod mechanisms for growth, regeneration and healing

Abstract

In recent years, we have seen a significant increase in our understanding of the mechanisms of development, regeneration, and healing of the respiratory system. However, most of these studies have been limited by their focus on mammalian systems. Here, we aimed to identify the underlying molecular mechanisms that are active during lung growth and tissue repair in amphibians, specifically Xenopus tropicalis (X. tropicalis). First, we analyzed the stem cell composition and signaling pathways that are active in epithelial and mesenchymal cells during lung growth. Then, we established a protocol for lung injury to assess the types of stem cells underlying tissue repair. In mammals, Sftpc+ (AT2) cells are alveolar stem cells that can differentiate to Krt8+ cells during lung homeostasis and post-injury repair. In this study, we identified Sftpc+ cells and Krt8+ cells, along with the activity of key developmental signaling pathways, Hippo and Wnt, during lung maturation at post-metamorphosis stages. We then established a protocol for lung injury using chemically induced injury with bleomycin, which damages the lung through oxidative stress. The results show an elevation in collagen post-injury, indicating bleomycins effect in causing lung fibrosis. X. tropicalis froglets survived 42 days post-injury, with a continuous decrease in fibrosis. To explore this effect, we analyzed the distribution of lung stem cells; Sox9 protein levels and Sftp gene expression were downregulated at the alveoli 42 days post-injury. The decrease in stem cell marker expression 42 days post-injury suggests they are differentiating as part of the healing process. Nevertheless, we could still detect them after a few weeks of healing. These results suggest that X. tropicalis has a regenerative capacity for lung tissue repair and that the same signaling pathways and stem cells are active in both amphibians and mammalian lungs during lung growth, regeneration, and healing. These findings show for the first time the physiological similarities between the anuran and the mammalian lung during growth and tissue repair processes, suggesting X. tropicalis as a potential animal model to study lung regeneration.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Perry, S. K., Shaidani, N.-I., Horb, M., Shubin, N. H.. 2024-10-12. The Xenopus respiratory system reveals common tetrapod mechanisms for growth, regeneration and healing. https://doi.org/10.1101/2024.10.10.617686

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

A bicistronic Aldh1a3-P2A-TagBFP knock-in reporter mouse line for studying genitourinary tract development

Aldehyde dehydrogenase 1a3 (Aldh1a3) is an enzyme involved in retinoic acid synthesis with dynamic expression patterns during development, including in the urogenital system. Here, we generated a bicistronic Aldh1a3-P2A-TagBFP knock-in mouse using CRISPR/Cas9 genome editing, inserting TagBFP immediately upstream of the endogenous Aldh1a3 stop codon. Correct targeting was confirmed by Oxford Nanopore long-read sequencing, and heterozygous and homozygous mice were viable and fertile without overt morphological abnormalities. TagBFP fluorescence faithfully overlapped with endogenous Aldh1a3 immunoreactivity and reproduced established expression domains in the developing craniofacial region, intestine, kidney, and broader urogenital system. Extensive characterization of the urogenital system revealed dynamic, spatially restricted BFP reporter activity in Aldh1a3-expressing domains across several key structures, including the ureteric bud and collecting duct lineage, seminal vesicles, caput epididymis, and developing uterine horns. The Aldh1a3-P2A-TagBFP mouse provides a fluorescent resource for visualizing Aldh1a3 expression across development and in adult tissues, including for the characterization of Aldh1a3-expressing domains in the urogenital system. The relatively low fluorescence intensity of TagBFP should be considered when assessing low-level reporter expression.

developmental biology↗

Translation of a small upstream open reading frame functions as a rheostat for the regulation of lin-41 by the Let-7 microRNA in Caenorhabditis elegans

MicroRNAs have been likened to the "dark matter" of eukaryotic genomes, reflecting their pervasive regulatory influence. MicroRNAs were first identified through genetic studies of developmental timing in the nematode Caenorhabditis elegans. Let-7 was the first microRNA recognized to be broadly conserved. The principal target of Let-7 in the developmental timing pathway is the TRIM-NHL RNA-binding protein LIN-41. During the L4 larval stage, Let-7 represses lin-41 translation by binding to two Let-7 complementary sites in the lin-41 3'UTR. Despite the importance of microRNA-based translational regulation, the underlying molecular mechanisms are incompletely understood. Through genetic analysis, we discovered an unrecognized feature of the mechanism by which Let-7 controls lin-41 translation. This mechanism requires a 5'-regulatory exon containing a seven-amino acid upstream open reading frame (uORF) and conserved sequence elements. Genome editing indicates that the specific uORF amino acid sequence itself is not important. Our data suggest that uORF translation and 5'UTR structure limit initiation at the downstream lin-41 start codon, enabling tight control by Let-7. Without this mechanism, the Let-7 microRNA is unable to properly regulate lin-41 to enable proper development.

developmental biology↗

Ductal myofibroblasts reactivate contractile program to stabilize alveolar architecture during lung regeneration

The alveolar sac architecture is essential for efficient gas exchange and must be precisely maintained throughout life; however, how this delicate structure is preserved during adult regeneration remains poorly understood. Using a mouse pneumonectomy model, we found that Lgr6+ Hhip+ ductal myofibroblasts, a poorly characterized mesenchymal population, are indispensable for maintaining alveolar integrity during lung regrowth. Comprehensive characterization using single-cell transcriptomics, mouse genetics, and pharmacological assays demonstrated that these ductal myofibroblasts secrete myogenic factors, most notably CCN4, to reactivate a myogenic program that converts them into contractile PA-DMFs, thereby preserving alveolar architecture. Lineage-tracing further revealed that these ductal myofibroblasts originate from embryonic MCAM- SMA+ distal progenitors via subepithelial TGF-{beta} signaling, serving as a lifelong guardian of alveolar structural integrity. Notably, cross-species analysis identified an analogous population of LGR6+ fibromyocytes in human respiratory bronchioles. Together, these findings indicate ductal myofibroblasts as a developmentally programmed cell population that reactivate a contractile program to structurally support the regeneration of adult lungs.

developmental biology↗