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bioRxiv · 10.1101/2024.05.17.594675

Anaerobiosis modulates the performance of antimicrobial resistance genes in Enterobacteriaceae

Ortiz, L.·Prieto, A.·Kieffer, N.·Vergara, E.·Canton, R.·San Millan, A.·Baquero, F.·Hipolito, A.·Escudero, J. A.
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Abstract

Bacteria must face and adapt to a variety of physicochemical conditions in the environment and during infection. A key condition is the concentration of dissolved oxygen, proportional to the partial pressure of oxygen (PO2), which is extremely variable among environmental biogeographical areas and also compartments of the human and animal body. Here, we sought to understand if the phenotype of resistance determinants commonly found in Enterobacterales can be influenced by oxygen pressure. To do so, we have compared the MIC in aerobic and anaerobic conditions of isogenic Escherichia coli strains containing 136 different resistance genes against 9 antibiotic families. Our results show a complex landscape of changes in the performance of resistance genes in anaerobiosis. Certain changes are especially relevant for their intensity and the importance of the antibiotic family, like the large decreases in resistance observed against ertapenem and fosfomycin among blaVIM {beta}-lactamases and certain fos genes, respectively; however, the blaOXA-48 {beta}-lactamase from the clinically relevant pOXA-48 plasmid conferred 4-fold higher ertapenem resistance in anaerobiosis. Strong changes in resistance patterns in anaerobiosis were also conserved in Klebsiella pneumoniae. Our results suggest that anaerobiosis is a relevant aspect that can affect the action and selective power of antibiotics for specific AMRs in different environments.

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Ortiz, L., Prieto, A., Kieffer, N., Vergara, E., Canton, R., San Millan, A., Baquero, F., Hipolito, A., Escudero, J. A.. 2024-05-17. Anaerobiosis modulates the performance of antimicrobial resistance genes in Enterobacteriaceae. https://doi.org/10.1101/2024.05.17.594675

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