PGC-1α drives small cell neuroendocrine cancer progression towards an ASCL1-expressing subtype with increased mitochondrial capacity

Varuzhanyan, G.; Chen, C.-C.; Freeland, J.; He, T.; Tran, W.; Song, K.; Wang, L.; Cheng, D.; Xu, S.; Dibernardo, G. A.; Esedebe, F. N.; Abt, E. R.; Park, J. W.; Memarzadeh, S.; Graeber, T.; Shirihai, O.; Witte, O. N.

doi:10.1101/2024.04.09.588489

bioRxiv · 10.1101/2024.04.09.588489

PGC-1α drives small cell neuroendocrine cancer progression towards an ASCL1-expressing subtype with increased mitochondrial capacity

Varuzhanyan, G.·Chen, C.-C.·Freeland, J.·He, T.·Tran, W.·Song, K.·Wang, L.·Cheng, D.·Xu, S.·Dibernardo, G. A.·Esedebe, F. N.·Abt, E. R.·Park, J. W.·Memarzadeh, S.·Graeber, T.·Shirihai, O.·Witte, O. N.

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Abstract

Adenocarcinomas from multiple tissues can evolve into lethal, treatment-resistant small cell neuroendocrine (SCN) cancers comprising multiple subtypes with poorly defined metabolic characteristics. The role of metabolism in directly driving subtype determination remains unclear. Through bioinformatics analyses of thousands of patient tumors, we identified enhanced PGC-1--a potent regulator of oxidative phosphorylation (OXPHOS)--in various SCN cancers (SCNCs), closely linked with neuroendocrine differentiation. In a patient-derived prostate tissue SCNC transformation system, the ASCL1-expressing neuroendocrine subtype showed elevated PGC-1 expression and increased OXPHOS activity. Inhibition of PGC-1 and OXPHOS reduced the proliferation of SCN lung and prostate cancer cell lines and blocked SCN prostate tumor formation. Conversely, enhancing PGC- 1 and OXPHOS, validated by small-animal Positron Emission Tomography mitochondrial imaging, tripled the SCN prostate tumor formation rate and promoted commitment to the ASCL1 lineage. These results establish PGC-1 as a driver of SCNC progression and subtype determination, highlighting novel metabolic vulnerabilities in SCNCs across different tissues. STATEMENT OF SIGNIFICANCEOur study provides functional evidence that metabolic reprogramming can directly impact cancer phenotypes and establishes PGC-1-induced mitochondrial metabolism as a driver of SCNC progression and lineage determination. These mechanistic insights reveal common metabolic vulnerabilities across SCNCs originating from multiple tissues, opening new avenues for pan-SCN cancer therapeutic strategies.

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Varuzhanyan, G., Chen, C.-C., Freeland, J., He, T., Tran, W., Song, K., Wang, L., Cheng, D., Xu, S., Dibernardo, G. A., Esedebe, F. N., Abt, E. R., Park, J. W., Memarzadeh, S., Graeber, T., Shirihai, O., Witte, O. N.. 2024-04-13. PGC-1α drives small cell neuroendocrine cancer progression towards an ASCL1-expressing subtype with increased mitochondrial capacity. https://doi.org/10.1101/2024.04.09.588489

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