bioRxiv · 10.1101/2024.02.05.578943
Deep Normative Tractometry for Identifying Joint White Matter Macro- and Micro-structural Abnormalities in Alzheimer's Disease
Abstract
This study introduces the Deep Normative Tractometry (DNT) framework, that encodes the joint distribution of both macrostructural and microstructural profiles of the brain white matter tracts through a variational autoencoder (VAE). By training on data from healthy controls, DNT learns the normative distribution of tract data, and can delineate along-tract micro- and macro-structural abnormalities. Leveraging a large sample size via generative pre-training, we assess DNTs generalizability using transfer learning on data from an independent cohort acquired in India. Our findings demonstrate DNTs capacity to detect widespread diffusivity abnormalities along tracts in mild cognitive impairment and Alzheimers disease, aligning closely with results from the Bundle Analytics (BUAN) tractometry pipeline. By incorporating tract geometry information, DNT may be able to distinguish disease-related abnormalities in anisotropy from tract macrostructure, and shows promise in enhancing fine-scale mapping and detection of white matter alterations in neurodegenerative conditions.
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Feng, Y., Chandio, B. Q., Villalon-Reina, J. E., Benavidez, S., Chattopadhyay, T., Chehrzadeh, S., Laltoo, E., Thomopoulos, S. I., Joshi, H., Venkatasubramanian, G., John, J. P., Jahanshad, N., Thompson, P. M.. 2024-02-06. Deep Normative Tractometry for Identifying Joint White Matter Macro- and Micro-structural Abnormalities in Alzheimer's Disease. https://doi.org/10.1101/2024.02.05.578943
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