Life stage impact on the human skin ecosystem: lipids and the microbial community

Pagac, M. P.; Davient, B.; Ravikrishnan, A.; Chua, E.; Irudayaswamy, A.; Srinivas, R.; Wearne, S.; Muralidharan, S.; Sridharan, A.; Mohamed Naim, A. N.; Ho, E.; Ng, A.; Kwah, J.; Png, E.; Bendt, A.; Wenk, M.; Torta, F.; Nagarajan, N.; Common, J.; Chong, Y. S.; Tham, E.; Shek, L.; Loo, E.; Chambers, J.; Yew, Y. W.; Loh, M.; Dawson, T.

doi:10.1101/2024.01.03.573871

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bioRxiv · 10.1101/2024.01.03.573871

Life stage impact on the human skin ecosystem: lipids and the microbial community

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Abstract

While research into gut-microbe interactions is common and advanced, with multiple defined impacts on human health, studies exploring the significance of skin-microbe interactions remain underrepresented. Skin is the largest human organ, has a vast surface area, and is inhabited by a plethora of microorganisms which metabolise sebaceous lipids. Sebaceous free fatty acids are metabolized into bioactive lipid mediators with immune-modulatory properties by skin-resident microbes, including Malassezia. Intriguingly, many of the same lipid mediators are also found on human skin, implying these compounds may have microbial or mixed microbial/human origin. To support this hypothesis, we isolated lipids and microbial DNA from the skin of prepubescent, adult, pre- and post-menopausal volunteers and performed correlational analyses using skin lipidomics and metagenomics to compare lipid mediator profiles and microbiome compositions on skin with either low or high sebaceous gland activity. We found that specific microbial taxonomies were positively and negatively correlated with skin lipid mediator species with high statistical significance. 2D in vitro co-cultures with Malassezia and keratinocytes also directly linked the production of specific lipid mediators, detected on healthy human skin, to secretion of immuno-stimulatory cytokines. Together, these findings further support the hypothesis that microbial-derived skin lipid mediators influence healthy skin homeostasis and skin disease development and progression, thereby spotlighting the relevance of the skin microbiomes footprint on human health.

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Pagac, M. P., Davient, B., Ravikrishnan, A., Chua, E., Irudayaswamy, A., Srinivas, R., Wearne, S., Muralidharan, S., Sridharan, A., Mohamed Naim, A. N., Ho, E., Ng, A., Kwah, J., Png, E., Bendt, A., Wenk, M., Torta, F., Nagarajan, N., Common, J., Chong, Y. S., Tham, E., Shek, L., Loo, E., Chambers, J., Yew, Y. W., Loh, M., Dawson, T.. 2024-01-04. Life stage impact on the human skin ecosystem: lipids and the microbial community. https://doi.org/10.1101/2024.01.03.573871

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