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bioRxiv · 10.1101/2023.11.29.569120

Competition for shared resources increases the impact of propagule size during coalescence of gut microbial communities

Goldman, D. A.·Xue, K. S.·Parrott, A. B.·Lopez, J. G.·Vila, J. C.·Petrov, D. A.·Good, B. H.·Relman, D. A.·Huang, K. C.
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Abstract

The long-term success of introduced populations depends on their initial size and ability to compete against existing residents, but it remains unclear how these factors collectively shape colonization. Here, we investigate how initial population (propagule) size and resource competition interact during community coalescence by systematically mixing eight pairs of in vitro microbial communities at ratios that vary over six orders of magnitude, and we compare our results to a neutral ecological model. Although the composition of the resulting co-cultures deviated substantially from neutral expectations, each co-culture contained species whose relative abundance depended on propagule size even after [~]40 generations of growth. Using a consumer-resource model, we show that this dose-dependent colonization can arise when resident and introduced species have high niche overlap and consume shared resources at similar rates. This model predicts that propagule size will have larger, longer-lasting effects in diverse communities in which niche overlap is higher, and we experimentally confirm that strain isolates show stronger dose dependence when introduced into diverse communities than in pairwise co-culture. This work shows how neutral-like colonization dynamics can emerge from non-neutral resource competition and have lasting effects on the outcomes of community coalescence.

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Goldman, D. A., Xue, K. S., Parrott, A. B., Lopez, J. G., Vila, J. C., Petrov, D. A., Good, B. H., Relman, D. A., Huang, K. C.. 2023-11-29. Competition for shared resources increases the impact of propagule size during coalescence of gut microbial communities. https://doi.org/10.1101/2023.11.29.569120

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