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bioRxiv · 10.1101/2023.09.10.557055

Is the distribution of plasmid lengths bimodal?

Dewan, I.·Uecker, H.
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Abstract

The length of a plasmid is a key property which is linked to many aspects of plas-mid biology. When distributions of plasmid lengths are shown in the literature, they are usually plotted with length on a logarithmic scale. However, a quantity and its logarithm have distinct distributions which may differ considerably in shape. Mistaking the distribution of log-lengths for the distribution of lengths can therefore lead to distorted conclusions about the distribution; in particular, the distribution of log-lengths may be bimodal when the distribution of lengths is only unimodal. This particular confusion has arisen in the literature where the length distribution is often claimed to be bimodal based on examination of what is in fact the log-length distribution. While the length distribution is indeed bimodal within many bacterial families, it is not across the ensemble of all plasmids. We suggest that authors should be careful to show the plasmid length distribution, or to distinguish the two distributions, to avoid misleading inferences. HighlightsO_LIThe distributions of lengths and log-lengths of plasmids are different, and have considerably different shapes. C_LIO_LIThe typical practice of using a logarithmic scale for plasmid lengths leads to confusion between the two distributions. C_LIO_LIIn particular, the distribution of log-lengths can be bimodal when the distribution of lengths is not. C_LIO_LIThe length distribution within bacterial families is often bimodal, but across all plasmids, it is unimodal. C_LIO_LIClearly distinguishing between the distributions will ensure that biological conclusions drawn from them are robust. C_LI

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Dewan, I., Uecker, H.. 2023-09-11. Is the distribution of plasmid lengths bimodal?. https://doi.org/10.1101/2023.09.10.557055

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