RNPS1 stabilizes NAT10 protein to facilitate translation in cancer via tRNA ac4C modification

Wang, X.; Li, K.; Cheng, M.; Xu, H.; Chen, J.; Peng, X.; Ling, R.; Wan, Y.; Ke, L.; Zhang, C.; Zhang, Q.; Zou, Y.; Chen, F.; Chen, Z.; Chen, S.; Li, J.; Peng, L.; Chen, Q.; Wang, C.; Liu, Q.; Chen, D.

doi:10.1101/2023.02.11.528122

bioRxiv · 10.1101/2023.02.11.528122

RNPS1 stabilizes NAT10 protein to facilitate translation in cancer via tRNA ac4C modification

Wang, X.·Li, K.·Cheng, M.·Xu, H.·Chen, J.·Peng, X.·Ling, R.·Wan, Y.·Ke, L.·Zhang, C.·Zhang, Q.·Zou, Y.·Chen, F.·Chen, Z.·Chen, S.·Li, J.·Peng, L.·Chen, Q.·Wang, C.·Liu, Q.·Chen, D.

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Abstract

NAT10 is dysregulated and plays an essential role in various types of cancers. However, the exact machenism of how NAT10 regulates cancer progression remains debatable. In this report, we show that NAT10 affects tumorigeneis mainly based on its acetylation function on tRNA. In addition, we found NAT10 regulate the ac4C of tRNA in cancer via interaction with RNPS1, which in turn protect NAT10 from degradation by E3 ubiquitin ligase ZSWIM6. We developed TRMC-seq method to compreshensively profile tRNA ac4C sites and uncovered the presence of ac4C in a broader range of tRNA isoacceptors than previous studies. Multi-omics analysis identified AP-1 signaling pathway as a major downstream mediator of NAT10. Mechanistically, we found NAT10 is responsible for the translation efficiency genes which contain higher ac4C-tRNA codon. Importantly, our genetic mouse model validated our in vitro findings of NAT10 in cancer. Our study highlights a role of NAT10 in mediating tRNA ac4C to regulate the translation and tumorigenesis of cancer.

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Wang, X., Li, K., Cheng, M., Xu, H., Chen, J., Peng, X., Ling, R., Wan, Y., Ke, L., Zhang, C., Zhang, Q., Zou, Y., Chen, F., Chen, Z., Chen, S., Li, J., Peng, L., Chen, Q., Wang, C., Liu, Q., Chen, D.. 2023-02-11. RNPS1 stabilizes NAT10 protein to facilitate translation in cancer via tRNA ac4C modification. https://doi.org/10.1101/2023.02.11.528122

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