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bioRxiv · 10.1101/2023.01.20.524881

Identification of novel sex determination loci in Japanese weedy melon

Nashiki, A.·Matsuo, H.·Takano, K.·Fitriyah, F.·Isobe, S.·Shirasawa, K.·Yoshioka, Y.
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Abstract

Sex expression contributes to fruit quality and yield in the Cucurbitaceae. In melon, orchestrated regulation by sex determination genes explains the mechanism of sex expression, resulting in a great variety of sexual morphologies. In this study, we examined the Japanese weedy melon UT1, which does not follow the reported model of sex expression. We conducted QTL analysis using F2 plants for flower sex on the main stem and the lateral branch and mapped a "femaleness" locus on Chr. 3 (Fem3.1) and a "type of flower femaleness" (female or bisexual) locus on Chr. 8 (tff8.1). Fem3.1 included the known sex determination gene CmACS11. Sequence comparison of CmACS11 between parental lines revealed three nonsynonymous SNPs. A CAPS marker developed from one of the SNPs was closely linked to femaleness in two F2 populations with different genetic backgrounds. The femaleness allele was dominant in F1 lines from crosses between UT1 and diverse cultivars and breeding lines. This study suggests that the identity of tff8.1 is CmCPR5, a recently reported bisexual flower control gene. We found that the Japanese weedy melon UT1 does not follow the conventional sex expression model because of the interaction of the loci Fem3.1 and tff8.1 with the previously reported sex determination genes. The results of this study provide new insights into the molecular mechanisms of sex determination in melons and considerations for the application of femaleness in melon breeding. Key messageJapanese weedy melon exhibits unique sex expression with interactions between previously reported sex determination genes and two novel loci.

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Nashiki, A., Matsuo, H., Takano, K., Fitriyah, F., Isobe, S., Shirasawa, K., Yoshioka, Y.. 2023-01-21. Identification of novel sex determination loci in Japanese weedy melon. https://doi.org/10.1101/2023.01.20.524881

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