Surveillance for SARS-CoV-2 in Ohio's wildlife, companion, and agricultural animals

Ehrlich, M.; Madden, C.; McBride, D.; Nolting, J. M.; Huey, D.; Kenney, S.; Wang, Q.; Saif, L.; Vlasova, A.; Dennis, P.; Lombardi, D.; Gibson, S.; McLaine, A.; Lauterbach, S.; Yaxley, P.; Winston, J.; Diaz-Campos, D.; Pesapane, R.; Flint, M.; Flint, J.; Junge, R.; Faith, S. A.; Bowman, A. S.; Hale, V. L.

doi:10.1101/2022.12.30.522311

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bioRxiv · 10.1101/2022.12.30.522311

Surveillance for SARS-CoV-2 in Ohio's wildlife, companion, and agricultural animals

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Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) emerged in humans in late 2019 and spread rapidly to become a global pandemic. A zoonotic spillover event from animal to human was identified as the presumed origin. Subsequently, reports began emerging regarding spillback events resulting in SARS-CoV-2 infections in multiple animal species. These events highlighted critical links between animal and human health while also raising concerns about the development of new reservoir hosts and potential viral mutations that could alter virulence and transmission or evade immune responses. Characterizing susceptibility, prevalence, and transmission between animal species became a priority to help protect animal and human health. In this study, we coalesced a large team of investigators and community partners to surveil for SARS-CoV-2 in domestic and free-ranging animals around Ohio between May 2020 and August 2021. We focused on species with known or predicted susceptibility to SARS-CoV-2 infection, highly congregated or medically compromised animals (e.g. shelters, barns, veterinary hospitals), and animals that had frequent contact with humans (e.g. pets, agricultural animals, zoo animals, or animals in wildlife hospitals). This included free-ranging deer (n=76), mink (n=57), multiple species of bats (n=65), and other wildlife in addition to domestic cats (n=275) and pigs (n= 184). In total, we tested 800 animals (34 species) via rRT-PCR for SARS-CoV-2 RNA. SARS-CoV-2 viral RNA was not detected in any of the tested animals despite a major peak in human SARS-CoV-2 cases that occurred in Ohio subsequent to the peak of animal samplings. Importantly, due to lack of validated tests for animals, we did not test for SARS-CoV-2 antibodies in this study, which limited our ability to assess exposure. While the results of this study were negative, the surveillance effort was critical and remains key to understanding, predicting, and preventing re-emergence of SARS-CoV-2 in humans or animals.

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Ehrlich, M., Madden, C., McBride, D., Nolting, J. M., Huey, D., Kenney, S., Wang, Q., Saif, L., Vlasova, A., Dennis, P., Lombardi, D., Gibson, S., McLaine, A., Lauterbach, S., Yaxley, P., Winston, J., Diaz-Campos, D., Pesapane, R., Flint, M., Flint, J., Junge, R., Faith, S. A., Bowman, A. S., Hale, V. L.. 2022-12-30. Surveillance for SARS-CoV-2 in Ohio's wildlife, companion, and agricultural animals. https://doi.org/10.1101/2022.12.30.522311

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