pomBseen: An Automated Pipeline for Analysis of Fission Yeast Images

Ohira, M. J.; Rhind, N.

doi:10.1101/2022.12.27.521403

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bioRxiv · 10.1101/2022.12.27.521403

pomBseen: An Automated Pipeline for Analysis of Fission Yeast Images

Ohira, M. J.·Rhind, N.

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Abstract

pomBseen is a image analysis pipeline for the quantitation of fission yeast micrographs containing a brightfield channel and up to two fluorescent channels. It accepts a wide range of image formats and produces a table with the number, size and total and nuclear fluorescent intensities of the cells in the image. Written in MATLAB, pomBseen is also available as a standalone application.

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Ohira, M. J., Rhind, N.. 2022-12-27. pomBseen: An Automated Pipeline for Analysis of Fission Yeast Images. https://doi.org/10.1101/2022.12.27.521403

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