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bioRxiv · 10.1101/2022.11.01.514681

OpenFIBSEM: an application programming interface for easy FIB/SEM automation

Cleeve, P.·Dierickx, D.·Buckley, G.·Gorelick, S.·Naegele, L.·Burne, L.·Whisstock, J. C.·de Marco, A.
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Abstract

Automation in microscopy is the key to success in long and complex experiments. Most microscopy manufacturers provide Application Programming Interfaces (API) to enable communication between a user-defined program and the hardware. Although APIs effectively allow the development of complex routines involving hardware control, the developers need to build the applications from basic commands. Here we present a Software Development Kit (SDK) for easy control of Focussed Ion Beam Scanning Electron Microscopes (FIB/SEM) microscopes. The SDK, which we named OpenFIBSEM consists of a suite of building blocks for easy control that simplify the development of complex automated workflows.

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Cleeve, P., Dierickx, D., Buckley, G., Gorelick, S., Naegele, L., Burne, L., Whisstock, J. C., de Marco, A.. 2022-11-02. OpenFIBSEM: an application programming interface for easy FIB/SEM automation. https://doi.org/10.1101/2022.11.01.514681

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