Single-nuclear RNA sequencing of endomyocardial biopsies identifies persistence of donor-recipient chimerism with distinct signatures in severe cardiac allograft vasculopathy

Amancherla, K.; Qin, J.; Hulke, M. L.; Pfeiffer, R. D.; Agrawal, V.; Sheng, Q.; Xu, Y.; Schlendorf, K. H.; Lindenfeld, J.; Shah, R. V.; Freedman, J. E.; Tucker, N. R.; Moslehi, J. J.

doi:10.1101/2022.08.24.504346

bioRxiv · 10.1101/2022.08.24.504346

Single-nuclear RNA sequencing of endomyocardial biopsies identifies persistence of donor-recipient chimerism with distinct signatures in severe cardiac allograft vasculopathy

Amancherla, K.·Qin, J.·Hulke, M. L.·Pfeiffer, R. D.·Agrawal, V.·Sheng, Q.·Xu, Y.·Schlendorf, K. H.·Lindenfeld, J.·Shah, R. V.·Freedman, J. E.·Tucker, N. R.·Moslehi, J. J.

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Abstract

Cardiac allograft vasculopathy (CAV) is the leading cause of late allograft failure and mortality after heart transplantation. As current standards of diagnosis and treatment of CAV have significant limitations, understanding cell-specific responses may prove critical for developing improved detection strategies and novel therapeutics. This study is the first to successfully utilize human endomyocardial biopsy (EMB) samples to isolate large numbers of intact nuclei for single-nuclear transcriptomics. These data also lay the groundwork for ongoing experiments to study serial, routinely-collected EMB specimens after heart transplantation to identify novel biomarkers and pathways through which early CAV pathogenesis can be interrupted, thereby prolonging allograft survival.

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Amancherla, K., Qin, J., Hulke, M. L., Pfeiffer, R. D., Agrawal, V., Sheng, Q., Xu, Y., Schlendorf, K. H., Lindenfeld, J., Shah, R. V., Freedman, J. E., Tucker, N. R., Moslehi, J. J.. 2022-08-26. Single-nuclear RNA sequencing of endomyocardial biopsies identifies persistence of donor-recipient chimerism with distinct signatures in severe cardiac allograft vasculopathy. https://doi.org/10.1101/2022.08.24.504346

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