Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems

lombard, f.; Bourdin, G.; Pesant, S.; Agostini, S.; Baudena, A.; Boissin, E.; Cassar, N.; Clampitt, M.; Conan, P.; da Silva, O.; Dimier, C.; Douville, E.; Elineau, A.; Fin, J.; Flores, J. M.; Ghiglione, J. F.; Hume, B. C. C.; Jalabert, L.; John, S. G.; Kelly, R. L.; Koren, I.; Lin, Y.; Marie, D.; McMinds, R.; Meriguet, Z.; Metzl, N.; Paz Garciax, D. A.; Pedrotti, M. L.; Poulain, J.; Pujo Pay, M.; Ras, J.; Reverdin, G.; Romac, S.; Rouan, A.; Rottinger, E.; Vardi, A.; Voolstra, C. R.; Moulin, C.; Iwankow, G.; Banaigs, B.; Bowler, C.; Forcioli, D.; Furla, P.; Galand, P. E.; Gilson, E.; Reynaud, S

doi:10.1101/2022.05.25.493210

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bioRxiv · 10.1101/2022.05.25.493210

Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems

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Abstract

AbstractThe Tara Pacific expedition (2016-2018) sampled coral ecosystems around 32 islands in the Pacific Ocean and the ocean surface waters at 249 locations, resulting in the collection of nearly 58,000 samples. The expedition was designed to systematically study warm coral reefs and included the collection of corals, fish, plankton, and seawater samples for advanced biogeochemical, molecular, and imaging analysis. Here we provide a complete description of the sampling methodology, and we explain how to explore and access the different datasets generated by the expedition. Environmental context data were obtained from taxonomic registries, gazetteers, almanacs, climatologies, operational biogeochemical models, and satellite observations. The quality of the different environmental measures has been validated not only by various quality control steps but also through a global analysis allowing the comparison with known environmental large-scale structures. Such a wide released datasets opens the perspective to address a wide range of scientific questions.

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lombard, f., Bourdin, G., Pesant, S., Agostini, S., Baudena, A., Boissin, E., Cassar, N., Clampitt, M., Conan, P., da Silva, O., Dimier, C., Douville, E., Elineau, A., Fin, J., Flores, J. M., Ghiglione, J. F., Hume, B. C. C., Jalabert, L., John, S. G., Kelly, R. L., Koren, I., Lin, Y., Marie, D., McMinds, R., Meriguet, Z., Metzl, N., Paz Garciax, D. A., Pedrotti, M. L., Poulain, J., Pujo Pay, M., Ras, J., Reverdin, G., Romac, S., Rouan, A., Rottinger, E., Vardi, A., Voolstra, C. R., Moulin, C., Iwankow, G., Banaigs, B., Bowler, C., Forcioli, D., Furla, P., Galand, P. E., Gilson, E., Reynaud, S. 2022-05-25. Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems. https://doi.org/10.1101/2022.05.25.493210

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