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bioRxiv · 10.1101/2022.03.13.484133

Direct colorimetry of imipenem decomposition as a novel cost effective method for detecting carabapenamase producing bacteria

Kotsakis, S. D.·Lambropoulou, A.·Miliotis, G.·Tzelepi, E.·Miriagou, V.·Tzouvelekis, L. S.
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Abstract

In the absence of a molecule that would collectively inhibit both metallo-{beta}-lactamases and serine reactive carbapenemases, containment of their genes spreading is the main weapon currently available for confronting carbepenem resistance in hospitals. Cost effective methodologies rapidly detecting carbapenemase producing enterobacteria (CPE) would facilitate such measures. Herein a low cost CPE detection method was developed that was based on the direct colorimetry of the yellow shift caused by the accumulation of diketopiperazines - products of the acid catalyzed imipenem oligomerization - induced by carbapenemase action on dense solutions of imipenem/cilastatin. The reactions were studied by spectrophotometry in the visible spectrum using preparations of {beta}-lactamases from the four molecular classes. The effects of various buffers on reactions containing the potent carbapenemases NDM-1 and NMC-A were monitored at 405 nm. Optimal conditions were used for the analysis of cell suspensions and the assay was evaluated using 38 selected enterobacteria including 29 CPE as well as nine carbapenemase-negative strains overexpressing other {beta}-lactamases. The development of the yellow color was specific for carbapenemase containing enzyme preparations and the maximum intensity was achieved in acidic or un-buffered conditions in the presence of zinc. When applied on bacterial cell suspensions the assay could detect CPE with 96.7 % sensitivity and 100 % specificity with results being comparable to those obtained with the CARBA NP technique. Direct colorimetry of carbapenemase-induced imipenem decomposition required minimum reagents while exhibited high accuracy in detecting CPE. Therefore it should be considered for screening purposes after further clinical evaluation. ImportanceCurrently, spread of multi-drug resistant (MDR) carbapenemase-producing enterobacteria (CPE), mostly in the clinical setting, is among the most pressing public health problems worldwide. In order to effectively control CPE, use of reliable and affordable methods detecting carbapenemase genes or the respective {beta}-lactamases is of vital importance. Herein we developed a novel method, based on a previously undescribed phenomenon, which can detect CPE with few reagents by direct colorimetry of bacterial suspensions and imipenem/cilastatin mixtures.

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Kotsakis, S. D., Lambropoulou, A., Miliotis, G., Tzelepi, E., Miriagou, V., Tzouvelekis, L. S.. 2022-03-13. Direct colorimetry of imipenem decomposition as a novel cost effective method for detecting carabapenamase producing bacteria. https://doi.org/10.1101/2022.03.13.484133

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