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bioRxiv · 10.1101/2022.02.16.480777

Excited-state dynamics of the all-trans protonated retinal Schiff base in CRABPII-based rhodopsin mimics

Li, G.·Hu, Y.·Pei, S.·Meng, J.·Wang, J.·Yue, S.·Wang, Z.·Wang, S.·Liu, X.·Weng, Y.·Peng, X.·Zhao, Q.
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Abstract

The rhodopsin mimic is a chemically synthetized complex with the retinyl Schiff base (RSB) formed between protein and the retinal chromophore, which can mimic the natural rhodopsin-like protein. The artificial rhodopsin mimic is more stable and designable than the natural protein and hence has wider uses in photon detection devices. The mimic structure RSB, like the case in the actual rhodopsin-like protein, undergoes isomerization and protonation throughout the photoreaction process. As a result, understanding the dynamics of the RSB in the photoreaction process is critical. In this study, the transient absorption spectra (TAS) of three mutants of the cellular retinoic acid-binding protein II (CRABPII)-based rhodopsin mimic at PH = 3 were recorded, from which the related excited-state dynamics of the all-trans protonated RSB (AT-PRSB) were investigated. The transient fluorescence spectra (TFS) measurements are used to validate some of the dynamic features. We find that the excited-state dynamics of AT-PRSB in three mutants share a similar pattern that differs significantly from the dynamics of 15-cis PRSB (15C-PRSB) of the rhodopsin mimic in neutral solution. By comparing the dynamics across the three mutants, we discovered that the aromatic residues near the {beta}-ionone ring structure of the retinal may help stabilize the AT-PRSB and hence slow down its isomerization rate. Furthermore, from the three mutants, we find one protein with near-infrared fluorescence emission up to 688 nm, leading to further possible applications in sensing or bioimaging.

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Li, G., Hu, Y., Pei, S., Meng, J., Wang, J., Yue, S., Wang, Z., Wang, S., Liu, X., Weng, Y., Peng, X., Zhao, Q.. 2022-02-17. Excited-state dynamics of the all-trans protonated retinal Schiff base in CRABPII-based rhodopsin mimics. https://doi.org/10.1101/2022.02.16.480777

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