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bioRxiv · 10.1101/2021.12.14.472730

Animal soil food web complexity triggers shifts in microbial communities, including PAH degraders, but without clear effects on phenanthrene phytoremediation

Abstract

The aim of this study was to determine whether the complexity of the animal soil food web (SFWC) is a significant factor influencing the soil microbial communities, the productivity of the willow, and the degradation rates of 100 mg kg-1 phenanthrene contamination. The SFWC treatment had eight levels: just the microbial community (BF), or the BF with nematodes (N), springtails (C), earthworms (E), CE, CN, EN, CEN. After eight weeks of growth, the height and biomass of willows were significantly affected by the SFWC, whereas the amount of phenanthrene degraded was not affected, reaching over 95% in all pots. SFWC affected the structure and the composition of the bacterial, archaeal and fungal communities, with significant effects of SFWC on the relative abundance of fungal genera such as Sphaerosporella, a known willow symbiont during phytoremediation, and bacterial phyla such as Actinobacteriota, containing many PAH degraders. These SFWC effects on microbial communities were not clearly reflected in the community structure and abundance of PAH degraders, even though some degraders related to the Actinobacteriota and the diversity of Gram-negative degraders were affected by the SFWC treatments. Overall, our results suggest that, under our experimental conditions, SFWC does not affect significantly willow phytoremediation outcomes. ImportancePolycyclic aromatic hydrocarbons (PAH) pose a threat to soil ecosystems. Phytoremediation is a green technology that can help restore ecosystems health affected by PAH contamination. Past research on phytoremediation of PAH has focused on the roles of plant and microbes in contaminant fates. However, soil environments usually harbor large faunal communities that interact with both the plant and the microbial communities, potentially altering the phytoremediation process. We hypothesized that soil food web complexity (SFWC), represented by increasing levels of soil fauna, influences PAH degradation through interactions with the plant and the microbes. In this study, we demonstrated that SFWC increases the plant biomass and changes the composition of the microbial community, especially the fungal structure. In our pot experiment, more complex levels of SFWC did not contribute to higher degradation rates, but the increased plant biomass and the higher relative abundance of fungal genera associated with lower plant stress could indirectly contribute to better phytoremediation outcomes. Our results highlight the importance of considering the contributions of soil fauna to the success of phytoremediation.

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Correa-Garcia, S., Corelli, V., Tremblay, J., Dozois, J. A., Mukula, E., Seguin, A., Yergeau, E.. 2021-12-16. Animal soil food web complexity triggers shifts in microbial communities, including PAH degraders, but without clear effects on phenanthrene phytoremediation. https://doi.org/10.1101/2021.12.14.472730

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