A Landmark-based Common Coordinate Framework for Spatial Transcriptomics Data

Andersson, A.; Andrusivova, Z.; Czarnewski, P.; Li, X.; Sundström, E.; Lundeberg, J.

doi:10.1101/2021.11.11.468178

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bioRxiv · 10.1101/2021.11.11.468178

A Landmark-based Common Coordinate Framework for Spatial Transcriptomics Data

Andersson, A.·Andrusivova, Z.·Czarnewski, P.·Li, X.·Sundström, E.·Lundeberg, J.

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Abstract

1The increasing amount of spatial transcriptomics data prompts for means to amalgamate observations from distinct experiments, especially attractive is to cast quantities from different sources into a common coordinate frame-work (CCF) to relate signals across space. We here present a method that enables transfer of information from multiple samples to a reference representing a CCF, and show its utility by analyzing an assortment of real and synthetic data sets.

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Andersson, A., Andrusivova, Z., Czarnewski, P., Li, X., Sundström, E., Lundeberg, J.. 2021-11-13. A Landmark-based Common Coordinate Framework for Spatial Transcriptomics Data. https://doi.org/10.1101/2021.11.11.468178

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