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bioRxiv · 10.1101/2021.10.13.464301

Epigenetic clock and methylation studies in gray short-tailed opossums

Horvath, S.·Haghani, A.·Zoller, J. A.·Raj, K.·Sinha, I.·Talbot, A.·Aviles Ruiz, Y.·Sears, K. E.
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Abstract

The opossum (Monodelphis domestica), with its sequenced genome, ease of laboratory care and experimental manipulation, and unique biology, is the most used laboratory marsupial. Using the mammalian methylation array, we generated DNA methylation data from n=100 opossum tissues including blood, liver, and tail. We contrast age-related changes in the opossum methylome to those of C57BL/6J mice. We present several epigenetic clocks for opossums that are distinguished by their compatibility with tissue type (pan-tissue and blood clock) and species (opossum and human). Two dual-species human-opossum pan-tissue clocks accurately measure chronological age and relative age, respectively. These human-opossum epigenetic clocks are expected to provide a significant boost to the attractiveness of opossum as a biological model.

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Horvath, S., Haghani, A., Zoller, J. A., Raj, K., Sinha, I., Talbot, A., Aviles Ruiz, Y., Sears, K. E.. 2021-10-13. Epigenetic clock and methylation studies in gray short-tailed opossums. https://doi.org/10.1101/2021.10.13.464301

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