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bioRxiv · 10.1101/2021.05.19.444822

The folding space of protein β2-microglobulin is modulated by a single disulfide bond

Morand, J.·Nunes, A.·Faisca, P. F.
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Abstract

Protein beta-2-microglobulin ({beta}2m) is classically considered the causative agent of dialysis related amyloidosis (DRA), a conformational disorder that affects patients undergoing long-term hemodialysis. Together with the wild type form, the {Delta}N6 structural variant, and the D76N mutant, have been extensively used as model systems of {beta}2m aggregation. In all of them, the native structure is stabilized by a disulfide bridge between the sulphur atoms of the cysteine residues 25 (at B strand) and 80 (at F strand), which has been considered fundamental in {beta}2m fibrillogenesis. Here, we use extensive Discrete Molecular Dynamics simulations of a full atomistic structurebased model to explore the role of this disulfide bridge as a modulator of the folding space of {beta}2m. In particular, by considering different models for the disulfide bridge, we explore the thermodynamics of the folding transition, and the formation of intermediate states that may have the potential to trigger the aggregation cascade. Our results show that the dissulfide bridge affects folding transition and folding thermodynamics of the considered model systems, although to different extents. In particular, when the interaction between the sulphur atoms is stabilized relative to the other intramolecular interactions, or even locked (i.e. permanently established), the WT form populates an intermediate state featuring a well preserved core, and two unstructured termini, which was previously detected only for the D76N mutant. The formation of this intermediate state may have important implications in our understanding of {beta}2m fibrillogenesis.

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Morand, J., Nunes, A., Faisca, P. F.. 2021-05-20. The folding space of protein β2-microglobulin is modulated by a single disulfide bond. https://doi.org/10.1101/2021.05.19.444822

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