VolcanoR - web service to produce volcano plots and do basic enrichment analysis

Naumov, V.; Balashov, I.; Lagutin, V.; Borovikov, P.; Alexeev, A.

doi:10.1101/165100

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bioRxiv · 10.1101/165100

VolcanoR - web service to produce volcano plots and do basic enrichment analysis

Naumov, V.·Balashov, I.·Lagutin, V.·Borovikov, P.·Alexeev, A.

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Abstract

Summary: We introduce VolcanoR - web based tool to analyse results of differential gene expression. It takes a table containing gene name p-value and foldChange as input data. It can produce publication quality volcano plots, apply different p-value and fold change thresholds and do basic GeneOntology and KEGG enrichment analysis with selected gene set. For now it supports H.sapiens, R.norvegicus and M.musclus.\n\nAvailability and Implementation: VolcanoR is wtitten using R Shiny framework. It is publically available at http://volcanor.bioinf.su or stand-alone application, that can be downloaded at https://github.com/vovalive/volcanoR\n\nContact: looongdog@gmail.com

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Naumov, V., Balashov, I., Lagutin, V., Borovikov, P., Alexeev, A.. 2017-07-18. VolcanoR - web service to produce volcano plots and do basic enrichment analysis. https://doi.org/10.1101/165100

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