Knowledge.Bio: A Web application for exploring, building and sharing webs of biomedical relationships mined from PubMed

Richard Bruskiewich; Kenneth Huellas-Bruskiewicz; Farzin Ahmed; Rajaram Kaliyaperumal; Mark Thompson; Erik Schultes; Kristina M Hettne; Andrew I Su; Benjamin M Good

doi:10.1101/055525

bioRxiv · 10.1101/055525

Knowledge.Bio: A Web application for exploring, building and sharing webs of biomedical relationships mined from PubMed

Richard Bruskiewich·Kenneth Huellas-Bruskiewicz·Farzin Ahmed·Rajaram Kaliyaperumal·Mark Thompson·Erik Schultes·Kristina M Hettne·Andrew I Su·Benjamin M Good

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Abstract

Knowledge.Bio is a web platform that enhances access and interpretation of knowledge networks extracted from biomedical research literature. The interaction is mediated through a collaborative graphical user interface for building and evaluating maps of concepts and their relationships, alongside associated evidence. In the first release of this platform, conceptual relations are drawn from the Semantic Medline Database and the Implicitome, two compleme ntary resources derived from text mining of PubMed abstracts.\n\nAvailability-- Knowledge.Bio is hosted at http://knowledge.bio/ and the open source code is available at http://bitbucket.org/sulab/kb1/.\n\nContact-- asu@scripps.edu; bgood@scripps.edu

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Richard Bruskiewich, Kenneth Huellas-Bruskiewicz, Farzin Ahmed, Rajaram Kaliyaperumal, Mark Thompson, Erik Schultes, Kristina M Hettne, Andrew I Su, Benjamin M Good. 2016-05-26. Knowledge.Bio: A Web application for exploring, building and sharing webs of biomedical relationships mined from PubMed. https://doi.org/10.1101/055525

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