@misc{indiciaefaa704a24f44, title = {Comprehensive benchmarking of somatic single-nucleotide variant and indel detection at ultra-low allele fractions using short- and long-read data}, author = {Ha, Y.-J. J. and Maziec, D. and Markowski, J. and Georges, S. J. and Parmalee, N. L. and Berselli, M. and Coorens, T. H. and Dong, S. and Gardiner, S. and Kalra, D. and Li, D. and Miao, B. and Musunuri, R. and Xue, L. and Yu, Z. and Walker, K. and Anderson, L. and Au, N. Y. and Cibulskis, C. and Doddapaneni, H. and Grochowski, C. M. and Jensen, D. M. and Lindsay, T. and Loy, K. and Narayan, A. and Narzisi, G. and Ou, J. and Pham, M. M. and Runnels, A. M. and Stergachis, A. B. and Sutherlin, L. M. and Wang, T. and Jin, H. and Feng, W. C. and Zhang, Y. and Veit, A. D. and Kim, C. T. and Chun, H.-J. E. and Ardlie, K. and Fulton, R. S. and Germer, S. and Gibbs, R. A. and Marth, G. T. and Bennett, J. T. and Park, P. J.}, year = {2025}, doi = {10.1101/2025.10.13.681545}, url = {https://www.biorxiv.org/content/10.1101/2025.10.13.681545v1}, note = {Source identifier: 10.1101/2025.10.13.681545} }