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zhou, d.

Publications and source records attributed to zhou, d..

2 recordsLinked to original sources
bioRxiv2025

Association between KCNC1 gene polymorphism and blood lipid levels in determining the efficacy of high-intensity interval training

ObjectiveThe potassium voltage-gated channel subfamily C member 1 (KCNC1) gene plays a crucial role in both neural excitability and lipid metabolism. However, the impact of its genetic polymorphisms on individual blood lipid levels and the efficacy of exercise interventions remains unclear. This study aimed to investigate the association between KCNC1 single nucleotide polymorphisms (SNPs) and baseline blood lipid levels in young Han Chinese individuals, as well as the relationship between lipid profiles and sensitivity to high-intensity interval training (HIIT). This research provides theoretical support for developing personalised exercise prescriptions based on genetic background to improve lipid health. MethodsThis study recruited 245 healthy Han Chinese university students (114 males, 131 females) without regular exercise habits. Participants underwent a standardised 12-week HIIT intervention programme, conducted three times weekly. Total cholesterol (TC), triglycerides (TG), high-density lipoprotein cholesterol (HDL-C), and low-density lipoprotein cholesterol (LDL-C) levels were measured before and after the intervention. Genotyping of the KCNC1 gene SNP was performed using the Infinium CGA chip. PLINK software was employed to construct linear regression models (with age, sex, BMI, and baseline lipid levels as covariates) to analyse the association between genetic polymorphisms and changes ({Delta}) in lipid parameters. ResultsFollowing 12 weeks of HIIT, all participants demonstrated significant improvements in TC, HDL-C, LDL-C, and TG levels (P<0.01). Association analysis revealed: 1) At baseline, the rs757511 locus was significantly correlated with HDL-C levels in males ({beta} = -0.112, P = 0.0445), with individuals carrying the A allele exhibiting higher baseline HDL-C; 2) Regarding HIIT responsiveness, three loci exhibited significant sex-specific associations: the C allele at rs6083540 was significantly associated with improved TG levels in females ({beta} = 0.1564, P = 0.025); the A allele at rs61882396 was significantly associated with improved TG levels in females ({beta} = -0.129, P = 0.032); the C allele at rs12574348 was significantly associated with improved LDL-C levels in males ({beta} = 0.1608, P = 0.048). ConclusionThis study first demonstrates an association between KCNC1 gene polymorphisms (rs6083540, rs12574348, rs61882396) and lipid sensitivity to HIIT in young Han Chinese populations, with this association exhibiting significant sex specificity. The findings suggest that the KCNC1 gene may serve as a key genetic mediator in exercise-regulated lipid metabolism. Future development of tailored HIIT programmes should account for individual genotypic and gender variations.

physiology↗
bioRxiv2019

Genome-wide identification of long non-coding RNAs and their regulatory networks involved in Apis mellifera ligustica response to Nosema ceranae infection

Long non-coding RNAs (lncRNAs) are a diverse class of transcripts that structurally resemble mRNAs but do not encode proteins, and lncRNAs have been proved to play pivotal roles in a wide range of biological processes in animals and plants. However, knowledge of expression pattern and potential role of honeybee lncRNAs response to Nosema ceranae infection is completely unknown. Here, we performed whole transcriptome strand-specific RNA sequencing of normal midguts of Apis mellifera ligustica workers (Am7CK, Am10CK) and N. ceranae-inoculated midguts (Am7T, Am10T), followed by comprehensive analyses using bioinformatic and molecular approaches. A total of 6353 A. m. ligustica lncRNAs were identified, including 4749 conserved lncRNAs and 1604 novel lncRNAs. These lncRNAs had low sequence similarities with other known lncRNAs in other species; however, their structural features were similar with counterparts in mammals and plants, including shorter exon and intron length, lower exon number, and lower expression level, compared with protein-coding transcripts. Further, 111 and 146 N. ceranae-responsive lncRNAs were identified from midguts at 7 day post inoculation (dpi) and 10 dpi compared with control midguts. 12 differentially expressed lncRNAs (DElncRNAs) were shared by Am7CK vs Am7T and Am10CK vs Am10T comparison groups, while the numbers of unique ones were 99 and 134, respectively. Functional annotation and pathway analysis showed the DElncRNAs may regulate the expression of neighboring genes by acting in cis. Moreover, we discovered 27 lncRNAs harboring eight known miRNA precursors and 513 lncRNAs harboring 2257 novel miRNA precursors. Additionally, hundreds of DElncRNAs and their target miRNAs were found to form complex competitive endogenous RNA (ceRNA) networks, suggesting these DElncRNAs may act as miRNA sponges. Furthermore, DElncRNA-miRNA-mRNA networks were constructed and investigated, the result demonstrated that part of DElncRNAs were likely to participate in regulating the material and energy metabolism as well as cellular and humoral immune during host responses to N. ceranae invasion. Finally, the expression pattern of 10 DElncRNAs was validated using RT-qPCR, confirming the reliability of our sequencing data. Our findings revealed here offer not only a rich genetic resource for further investigation of the functional roles of lncRNAs involved in A. m. ligustica response to N. ceranae infection, but also a novel insight into understanding host-pathogen interaction during microsporidiosis of honeybee.

bioinformatics↗