Biology subjects

de Franceschi, C.

Publications and source records attributed to de Franceschi, C..

3 recordsLinked to original sources

bioRxiv2026

Widespread circulation of West Nile and Usutu viruses in sedentary and migratory avifauna: A Two-Year Study (2024-2025) of active surveillance in South of France

West Nile virus (WNV) and Usutu virus (USUV) are neurotropic Orthoflaviviruses sharing a similar enzootic transmission cycle primarily involving Culex pipiens mosquitoes as vectors and birds as amplifying hosts. First identified in Africa, both viruses established endemicity across Europe over the past two decades, most likely introduced and spread by migratory bird species along Mediterranean flyways. In avian species, infection outcomes range from subclinical to fatal neuroinvasive disease, varying by viral strain, host immunity, and species susceptibility. Southern France emerges as a key hotspot for the circulation of these viruses, supported by diverse avian habitats conducive to year-round viral maintenance. This study investigated the prevalence of WNV and USUV in more than 2500 sedentary and migratory wild birds from these regions during 2024-2025 using molecular surveillance. Samples were collected using mist net and bird boxes, across multiple passerine and non-passerine taxa, spanning wetlands, urban fringes, and agricultural zones. Our analyses revealed widespread viral circulation across diverse species, mainly among passerines such as great tits, house sparrows, and barn swallows with USUV detected at higher rates than WNV in both study years. Overall prevalence was markedly higher in 2024 than in 2025, potentially reflecting climatic or ecological drivers. Migratory individuals likely seed viral introductions during seasonal passages, whereas resident populations sustain local enzootic cycles, facilitating overwintering persistence. These results highlight the pivotal role of mixed avifauna in arbovirus dynamics within Mediterranean Europe and emphasize the necessity for integrated, year-round surveillance targeting high-risk species and habitats. Enhanced monitoring will aid in predicting spillover risks and informing vector control strategies to mitigate zoonotic threats.

microbiology↗

bioRxiv2024

Variations in flight strategy of small migratory birds crossing major ecological barriers

The recent development of tracking technologies has revealed remarkable diel flight altitude changes over the Sahara Desert in small migratory bird species. However, the drivers and the traits that explain these crossing strategies remain poorly understood in part because so few species and barriers have been studied. Using a unique dataset from 67 recovered multi-sensor loggers, deployed across 17 species, we investigated when, where, and how birds cross two major marine barriers (Bay of Biscay, Mediterranean Sea) and a desert barrier (Sahara). Then, we relied on a comparative approach to examine the influence of wing morphology and plumage colour on these strategies. Our findings reveal important differences across barrier types. On average, birds fly at 1,600 m over the desert during nighttime, ascending to 2,800 m for prolonged daytime flights, while species crossing marine barriers fly significantly lower (750 m on average), in some cases flying just above the water surface during prolonged daytime flights. Wing morphology and plumage colour influence barrier-crossing strategies: flight altitude increases with wing area during both sea and desert crossings, and darker birds ascend to higher elevations during daytime Sahara crossings, likely to access cooler air and reduce solar heating. These findings refine hypotheses on barrier-crossing strategies and suggest broader ecological and evolutionary implications for migratory birds facing extreme environments.

ecology↗

bioRxiv2021

Identifying drivers of spatio-temporal variation in survival in four blue tit populations

In a context of rapid climate change, the influence of large-scale and local climate on population demography is increasingly scrutinized, yet studies are usually focused on one population. Demographic parameters, including survival, can vary significantly across populations of a given species, depending on global or local climatic fluctuations but also on many other population-specific parameters such as breeding density, habitat naturalness, predation or parasitism. Such ecological differences between populations could lead to different paces-of-life (POL), whereby populations where individuals display higher reproductive investment and bolder behaviours would have lower survival probabilities. We use here long-term (19 to 38 years) monitoring datasets from four Mediterranean populations of blue tits (Cyanistes caeruleus) to investigate the effects of sex, age class, large-scale and local climate temporal variation and population breeding density, on adult survival, using Capture-Mark-Recapture modelling. Environment heterogeneity in these four populations (two in evergreen and two in deciduous forests) has been linked to strong multi-trait phenotypic variation, suggesting blue tits in deciduous forests display faster POL compared to their conspecifics in evergreen habitats. The present results show heterogeneity in average survival probabilities across the four populations, with, as predicted, lower survival in the fast blue tits occupying deciduous habitats. Interestingly, the year-to-year variation in survival probabilities was synchronous among populations. This suggests that regional environmental conditions could drive survival fluctuations across populations. However, breeding densities were not correlated across populations, and we found no evidence that adult survival is correlated with either large-scale or local, climate temporal variation in these four blue tit populations. Finally, two of the focal populations displayed a linear temporal decrease in adult survival over the study period, calling for further investigation to explain this decline. Overall, this multi-site study shows that blue tit parental survival from one spring to the next can vary substantially across years, in a synchronous way across populations, yet the climate indices we used are not correlated with the temporal variation. This calls for further investigations in other potential drivers such as resource (in particular insect) abundance, predation or parasitism.

ecology↗